Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00056 ATGATAAAGGAAGCAATTTTCATGCATAATTTACGCATGATCCATACCAACTTGAAGCCCGAAAACATACTTCTTGTTTCACAAGAACGTGTATTCCGTGCTCAATTTGATGATGGAAAGGTTCTCGCTGTGAAGAAGATAGATTCATCTATCCTTCCCAATGGTTTGTCTGAAGATTTTGTAGAACTAGTTTCAAACATCTCCCATTTGCATCATCCCAATGTGACAGAGCTTGTAGGTTATTGTTCAGAGCATGGGCAACACCTCCTAGCGTATGAGTTTCATAAAAATGGATCGCTGCATGACTTCCTTCACCTTCCTGATGAGTATACTAAACCATTGATATGGAATTCACGTGTCAAGATTGCTTTGGGGACCGCACGTGCTTTAGAGTACCTACATGAAGTTTGTTCTCCATCAGTTGTTCATAAGAATATTAAGTCAGCCAACATATTACTTGATGCAGATGTTAATCCTCATCTTTCTGACAGTGGATTGGCCAGCTATATTCCAAATGCAAACCAGGTGTTGAACAATAATGCTGGATCTGGATACGAAGCTCCCGAAGTTGGCTTGTCTGGTCAGTACACTCTCAAGAGTGATATCTACAGCTTCAGAGTTGTCATGTTGGAACTTCTCACTGGACGGAAACCATTTGATAGCTCAAGGCCAAGGTTTGAGCAGTCTTTGGTTCGATGGGCAACCCCTCAGCTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCACTTGAAGGGTTATACCCTGCCAAGTCTCTTTCTCGATTTGCTGATGTTATTGCTCTTTGTGTTCAGTCGGAACCTGAATTCCGACCACCTATGTCTCAGCCAACAGGATAA 864 0.4201 MIKEAIFMHNLRMIHTNLKPENILLVSQERVFRAQFDDGKVLAVKKIDSSILPNGLSEDFVELVSNISHLHHPNVTELVGYCSEHGQHLLAYEFHKNGSLHDFLHLPDEYTKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDADVNPHLSDSGLASYIPNANQVLNNNAGSGYEAPEVGLSGQYTLKSDIYSFRVVMLELLTGRKPFDSSRPRFEQSLVRWATPQLHDIDALAKMVDPALEGLYPAKSLSRFADVIALCVQSEPEFRPPMSQPTG* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00056 287 Gene3D Phosphorylase Kinase; domain 1 3 94 - -
Rops10g00056 287 Pfam Protein tyrosine and serine/threonine kinase 40 284 IPR001245 GO:0004672|GO:0006468
Rops10g00056 287 SUPERFAMILY Protein kinase-like (PK-like) 30 284 IPR011009 -
Rops10g00056 287 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 95 285 - -
Rops10g00056 287 ProSiteProfiles Protein kinase domain profile. 1 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00056 287 Gene3D Transferase(Phosphotransferase) domain 1 96 286 - -
Rops10g00056 287 PANTHER OS01G0253100 PROTEIN 20 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00056 Rops-Chr10 2059686 2060743 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00056 30 284 Strubbelig Receptor Gene Family AT1G53730 80.469 8.18e-151 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Rops10g00056 PK_Tyr_Ser-Thr 5.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00056 - - gmx:100780323 479.944