Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00049 ATGCATGAGCAGCCGGTGATGCGAGCTGGTGCAGGAAGGTTTCCTCTCAACCTAGGCACAACATTCTTCCCTGGGTCCTTTCCGTCTACCATCACGTTGGAAGCCATGCATGCATTCTGCCAACTTCACGTGAAGAGCTTCAGCGAGCTGGCCAACTTCACCATCGGAGTCCTTGAAGCTGCATGGGTGTATAATATGCATGGAAGTAACGTGGCACACGTGTTCTACTGTTGGAGGAGGCATGAAAACAATCTATCCATTGGGGTTAACTTCAATGACTTTGAATACAAAGTCTATGTCTATGATGAGAGGGAAACCTGGGCACACGAAACACTCGGAGATTTGCTTAAGCCTATGGATGAGCCTCGGGATTTCTACAAGAAGCAGCAGCTTCGGGAGCTAGCAGTGCTGAATGGTACTCTTCGCGAGGAGGGTTCTCCTATGTTAGGTTCTGTTTCACCCTTCCACAACAACCTTGCAAAGAAGTATTTAAAATTGAGATCATTCTGTGCTCCTACGGTTCTTCTCTCCTTGGCCATGCAAGAAATCTTTCGAGGGTTCAAGGACACAACAACTCCTTTATATGTCATAGTTTCGGGATATGCATTGAATGTGATTTTGATCTCTCTAAGGTGTGCTGTCAGTCCAACTTTGGTGAAGTCATCAAACTCTAGCTTGGAGACAAAAAGCTCAGGATACTGCATTCAGCCTGCTTGCATTGAACCAACTTGTGTAATGAAGCCAGACCGCATCCGACCTTCATGTTTTACTCCGCGTTTTCTATCTGGAAAATCGAAGAAAGAAAAAAAGTTGAAACCAAAGAATGACATGCATAATCAGGTGACCCCTCTCCCTGAGCTTGCGCCTGAGCCCACGCACCACACCAACAGCTTGTCACCCTCCTCAGCTGCTACCCCTCTTTCCTCTGCATTCACCAACACAAAACCAGGACCTCTCCCTCTCCTCCGTCCAATGTAA 978 0.4714 MHEQPVMRAGAGRFPLNLGTTFFPGSFPSTITLEAMHAFCQLHVKSFSELANFTIGVLEAAWVYNMHGSNVAHVFYCWRRHENNLSIGVNFNDFEYKVYVYDERETWAHETLGDLLKPMDEPRDFYKKQQLRELAVLNGTLREEGSPMLGSVSPFHNNLAKKYLKLRSFCAPTVLLSLAMQEIFRGFKDTTTPLYVIVSGYALNVILISLRCAVSPTLVKSSNSSLETKSSGYCIQPACIEPTCVMKPDRIRPSCFTPRFLSGKSKKEKKLKPKNDMHNQVTPLPELAPEPTHHTNSLSPSSAATPLSSAFTNTKPGPLPLLRPM* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00049 325 Gene3D K Homology domain, type 1 80 148 IPR036612 GO:0003723
Rops10g00049 325 Pfam MatE 158 207 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Rops10g00049 325 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 158 210 IPR044644 -
Rops10g00049 325 MobiDBLite consensus disorder prediction 292 315 - -
Rops10g00049 325 MobiDBLite consensus disorder prediction 266 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00049 Rops-Chr10 1874814 1876625 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00049 208 292 AGC Kinase Gene Family AT3G27580 58.140 2.83e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00049 K08286 - gmx:100802402 141.354