Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00047 ATGGTCAGCCAAAGACCATCATGCAGCACATGCAAACTTCACGTAAATAATGTGCTCAACACTTACTGCAAAACTGAGTTTCGTTTGCAACCCTCTCTCCCTCTCTCTTTGGTGCTGCCTTCACTTGCCCGAGAGAATGAGAGCCCTCGTGAGGAAGCTACTCATGCTCCCACGTCATCCACGACAGCCCACTTCTTCCATGCAGCTCATATCATTGGTTCCTACACAATGAATATGGAAGAATTCGTGATGAGTGCTGAGCTTGCCGGGGTCATTCCTCCTTTGGTTGAGCTTTTAAGAAGTAGATTAACTTGGGTTGAGCAGAGGGTAGCAGTTAGAGCTTTGGGACGTTTAGCTACATATGGCAGCACTCCCGTGTTCAAGGAGCAAGGCAACTTCATGAAGCTTGGGCTGTCAAAACTGCTCCCATGTTGTTCGTTCATGAGCACGACCAAGCCAAAGCTTGGTACCACTTCTAATGCTGGCTGCATGGTCAACCACCTTGCTCCATTTGCAAAGGTGGTGCAACTACGTGAATTCACGACAAAGGAGTATGGCATGTTTCGTTGCATGGTAAGGTATGGTTACAAGGACTTGCAACAGGAGAACTATAATTTTGAGAATAAATTGATATCTACTATGATACAATTCGTAGAAACAGAAGAGGAGAACATTCCAGAATCCATTCATGAGTTGTCTGCAAATGATGGGAACTCAAAAGTGGAAGATCTTGGTGTGTCACAGAACATGTTTGGCAAGCCTTGTTCTGAAAAGAACTTGTTCCCATCTTCATGTGTTTTGCAAGTGATGATGAATGGTGGTGACCATCTTGAAAAGCCTCTCTACAAAGACGAGAGGAGGAAGCATGACCCCAAAACGGGTGGCTGGGCTTTGCATGGAGGAACTCCGTCGTCTGCGACGGCTCCGGCGTTGGTATTTGTCAAACTCCGGGAAGCAGATCGATCAAGCGGGGAGGAAGAAGTACGTGAAGCAAGTGACTGGAAGGCACAACGACATGGAGCTTCGCCTTGCAGCTCAAAGGGGTGGTGTTGGTGCTGTGAAACAGTCCTTCTCGATATGGGTTCTCAGAAAATGGGGACTTTGAGCGGTGATGATGACGGGCTTAACGCTGAGATTGACGAGATAAGAAGCACTGATAATTTTCCTCAGGAGAGCATTGAGAATACTCTAGAACCAAGAGACAACGTGGCTGGTAGATATTCCTACTGGTCAAGTAATGGACAAAGTAATCCCTACGTGCCTGAGACGTTAACATACGAGTTGGTCTCTCAAATTTGTGTTGTTACGGAAATCAATATCCAGCCTTTTCAAGCTGACTTTCAGACGGGGTCACCTATATATTCAGCAAAATCTGTTCGATTTAGAATGGGTCATATTAAAGCCTCATTTGATTCTTCATCTGATGAAAAGTATGCATGGACGTACACGTCACCAGAGTTCCCAATGACTCAGGAATACCGGCTACAGAATTTCAAGCTTCCAGAACCTGTACTTTGTATTGGTGGTATCTTGCAGATTGAACTTTTGGGAAGGGTACAGAGGCAAGAAATGGATGGCTTATTATACATCTGTGTTTCTTATGTTCAAGCCCTGGGGTCCTCATTGTCACCAGCATTTAGTGTTGATATTCTGGAGCCCTCTGGAATGTTTGTGTTAAAGAGGGACCGGCTGGCCAACTATCCACCCCCCTTTGGGATGTTAATAGGGTCGCTTGTGTTATGA 1743 0.4573 MVSQRPSCSTCKLHVNNVLNTYCKTEFRLQPSLPLSLVLPSLARENESPREEATHAPTSSTTAHFFHAAHIIGSYTMNMEEFVMSAELAGVIPPLVELLRSRLTWVEQRVAVRALGRLATYGSTPVFKEQGNFMKLGLSKLLPCCSFMSTTKPKLGTTSNAGCMVNHLAPFAKVVQLREFTTKEYGMFRCMVRYGYKDLQQENYNFENKLISTMIQFVETEEENIPESIHELSANDGNSKVEDLGVSQNMFGKPCSEKNLFPSSCVLQVMMNGGDHLEKPLYKDERRKHDPKTGGWALHGGTPSSATAPALVFVKLREADRSSGEEEVREASDWKAQRHGASPCSSKGWCWCCETVLLDMGSQKMGTLSGDDDGLNAEIDEIRSTDNFPQESIENTLEPRDNVAGRYSYWSSNGQSNPYVPETLTYELVSQICVVTEINIQPFQADFQTGSPIYSAKSVRFRMGHIKASFDSSSDEKYAWTYTSPEFPMTQEYRLQNFKLPEPVLCIGGILQIELLGRVQRQEMDGLLYICVSYVQALGSSLSPAFSVDILEPSGMFVLKRDRLANYPPPFGMLIGSLVL* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00047 580 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 384 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00047 Rops-Chr10 1840007 1842156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00047 183 241 Inorganic Solute Cotransporters AT3G02050 44.068 1.58e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00047 - - gmx:100527814 320.472