Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00002 ATGGTCTTTTCCATACAAGTCCTGCAGAATGCCACTGACAATTTCAATGAGAAAATTATACTGGGAAAAGGAGGTTCCGAGATAGTTTATAAATGTGAACTCCATGATAGTACCAAAATTGCAGTTAAAAGAATGAAATCTGGGACAATAACTGGGAGAGGTGCAACAGAATTTGAGACTGAAATTGTTGTCTTAATGAAGGTTCATCACCGACATCTTGTTGTTCTTCTTGGTTACTACATAGATGGGAATGAGAAGCTTCTTGTGTATGAGTACATGCCTCAAGGGACACTTAGTAGGCATCTTTTTAAATGGCAAGAGGAAGGACTGGAACCACTGGAGTGGACTAGAAGATTGGCCATTGCCTTAGATGTGGCAAGGGGTGTTGAGTACCTCCATGGCTTGGCCCATCACAGCTTCATACTCAGAGACTTGAAACCATCAAACATTCTCCTTGAAGAAGACATGAAGGCAAAAGTCACAGATTTTGGTCTAGTGTGTCTTGTTCTAAAAGGAAAATTCTATATTGAAACAGGAATGGCAGGAACTTTTGGATATTTGGCACCAGAATATGCAGTTACTGGCTTTGTGACAACTAAAGTTGATGTGTTCAGCTTTGAAGTAATCTTGATGGAGCTGATAACTGGGAGAAAAGCACTTGATGAGATCCAATCTGAGGATAGCAAGCACCTTCCAACATGGTTCCGCAGAATGTATATCAACAAGGACTCATTTTTGGCAAGGCCATTGATCCCACAATTCAGATTAATGAGGAAACACTTACAAGTATTCACACGGTAG 801 0.4045 MVFSIQVLQNATDNFNEKIILGKGGSEIVYKCELHDSTKIAVKRMKSGTITGRGATEFETEIVVLMKVHHRHLVVLLGYYIDGNEKLLVYEYMPQGTLSRHLFKWQEEGLEPLEWTRRLAIALDVARGVEYLHGLAHHSFILRDLKPSNILLEEDMKAKVTDFGLVCLVLKGKFYIETGMAGTFGYLAPEYAVTGFVTTKVDVFSFEVILMELITGRKALDEIQSEDSKHLPTWFRRMYINKDSFLARPLIPQFRLMRKHLQVFTR* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00002 266 ProSiteProfiles Protein kinase domain profile. 15 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00002 266 PANTHER OSJNBA0070M12.3 PROTEIN 1 246 - -
Rops10g00002 266 FunFam receptor-like protein kinase FERONIA 1 92 - -
Rops10g00002 266 Pfam Protein kinase domain 17 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00002 266 SUPERFAMILY Protein kinase-like (PK-like) 2 241 IPR011009 -
Rops10g00002 266 Gene3D Transferase(Phosphotransferase) domain 1 93 262 - -
Rops10g00002 266 SMART serkin_6 15 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g00002 266 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00002 Rops-Chr10 149570 150450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00002 3 238 Trihelix Transcription Factor Family AT1G70460 45.763 1.18e-62 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Rops10g00002 Pkinase 5.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00002 K00924 - gmx:100813768 378.637