Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2705 ATGTGGTGGAGATCAGCATCATTCATCATGGACAGGCAGCAGAACGAGGCTGCGCTCAAGGGAGACACCGTAGCTCCTACAGACTCCTCAATATCAAACCCTAACCCTAACCCTAACCCTATGACCTCTGCATACTATGAGACCAGAGCAGCACACCACGGCGTTGTCACCAGCGACTGGCTGGCCCAGGCTCAGGCCGCCATTGGGCCGGACCCTGATCCTCTACCTCAACTCAGGCCTGATCCTGACAAGCCGTTCAGCGTCATCAACGAGTTTAATAGCTGGCGGAAACAGCCCCATTTGGCGGAGGCTGTCGCCGCCATTCGCGCCTTGGCCGCCGTCATACGGTCCAGCCAGGCTACCACCATGATGCAGCTGGAAATCGAGCTGAAGAAGGCCTCCGATTCTCTCAAGTCGTGGGATGCGACCTCTATCTCTTTGACAGCGGGCTGTGATCTCTTTATGCGATATGTCACTCGGACTTCTGCTTTAGAATACGAAGACCTCAATTCCGCTAAATCTCGCTTGATTGAGCGTGCGGAGAAGTTCGGCGAAATCTCCTACAAGGCCCGCAAAGTTATTGCAATGTTGAGTCAGGATTTTATATTTGATGGTTGTACAATTTTGGTTCATGGCTTTTCCAGAGTTGTCTTTGAAGTCCTCAAACTGGCAGCACAAAACAAAAAATTATTTCGGGTCTTCTGCACAGAGGGAAGACCAGATCGAACAGGATTGCGGTTGTCCAATGAGCTGGCCAAGCTTGATGTTCCTGTGAAACTACTAATAGATTCTGCTGTGGCATATACTATGGATGAGGTGGACATGGTTTTTGTAGGTGCAGATGGAGTTGTGGAAAGTGGGGGCATAATCAACATGATGGGGACCTACCAAATTGCACTGGTTGCACACGGTATGAATAAACCAGTTTATGTCGCTGCTGAAAGCTACAAGTTTGCTCGTCTCTACCCTCTTGACCAAAAGGATTTAGCCCCTGCTTTACGCCCTATTGATTTCGGTGTACCTATTCCTTCCAAGGTTGAAGTTGAAAGGTCCGCGCGGGACTACACCCCTCCTCAATACCTGACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCATCTGTTGTCAGTGATGAGCTGATCCAGCTATACTTATAG 1158 0.4948 MWWRSASFIMDRQQNEAALKGDTVAPTDSSISNPNPNPNPMTSAYYETRAAHHGVVTSDWLAQAQAAIGPDPDPLPQLRPDPDKPFSVINEFNSWRKQPHLAEAVAAIRALAAVIRSSQATTMMQLEIELKKASDSLKSWDATSISLTAGCDLFMRYVTRTSALEYEDLNSAKSRLIERAEKFGEISYKARKVIAMLSQDFIFDGCTILVHGFSRVVFEVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHGMNKPVYVAAESYKFARLYPLDQKDLAPALRPIDFGVPIPSKVEVERSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2705 385 MobiDBLite consensus disorder prediction 25 43 - -
Pvu9g2705 385 Pfam Initiation factor 2 subunit family 100 373 IPR000649 GO:0044237
Pvu9g2705 385 Gene3D - 85 186 IPR042528 -
Pvu9g2705 385 MobiDBLite consensus disorder prediction 19 43 - -
Pvu9g2705 385 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 42 385 - -
Pvu9g2705 385 SUPERFAMILY NagB/RpiA/CoA transferase-like 101 384 IPR037171 -
Pvu9g2705 385 Gene3D - 188 385 IPR042529 -
Pvu9g2705 385 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 42 385 - -
Pvu9g2705 385 Coils Coil 123 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2705 Pvu-Chr9 37357559 37360363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2705 1 385 Eukaryotic Initiation Factors Gene Family AT1G53880 80.307 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2705 K03239 - gmx:100799015 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2705 9 37357559 37360363 Pvu10g1288 10 39371132 39373478 PCT