Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2702 ATGACAAACAAAATCAGACAAGCTCTTCCAACTATTTCGGATGCCCTCACCAAGAACAAGACCAAAACCACACTCTTGTTCGCTCTTGCTGCCACTCTCTTTATCGCCCTCGCTGTCGTCGCCGGAGTCAGCTCTCGCAAGAACTCCGCCCACAATGCCTCCTCCACTTCGTCACATGCCATCATCAAAAGTGCCTGCAGCAGCACCTTGTACCCGGAGTTGTGCCTCTCAAGCATAGCCTCTGAACCCGGCAAAGCCGACAAAGTTTCCACCCACAAGAACGTGATAGAGCAGTCGCTGAACATAACCGTTGGAATCGTTGAGCGGAATTACTTCACCGTGGAGAAGCTCTTACGCAAAAAGGGCCTTACCAAGAGGCAGAAAACGGCCCTCCACGATTGCTTGGAAACCATTGACGAGACCCTCGACGAGCTCCACAAGGCCATAGATGAACTCAAAGAGTACCCCTCCAAGAAGTCTCTGTCGCACCACGCCGAGGATCTCAAAACTCTCATGAGTTCGGCCATAACCAACCAAGAGACTTGCCTCGACGGCTTCTCTCACGACCAGGCCGACAAGAGACTGAGGCAGCATCTCCAGGCAGGGCAAGTGCACGCAGAGCACTTGTGCAGCAACGCATTGGCCATGACAAAGAACCTCACTGACAACGACATGGCCATGGCCATGTCCAACAACGTCGAAAACGAGCGCAGGAAAACCATGGAGGACCCCCATGAAATCGTGTGGCCCCACTGGATTTCCGCCGCCGACCGCCGCCTTCTGCAGACGGGTACGGTCAAACCTGACGTGGTGGTGGCTGCGGACGGCAGCGGGAACTTCAGGACGGTGTCGGCTGCGGTGGCTGCGGCTCCTGAGAAGAGTAGCAAGAGATACGTGATCAGGATCAAAGCGGGTGTGTACAGGGAAAACGTGGATGTGTCGAAGAAGAAGACCAACATAATGTTCCTCGGCGATGGAAGAACCAACACCATCATCACAGCTAGTAGAAACGTGGTTGATGGCAGCACCACCTTCAATTCTGCCACAGTAGTGGTGGTGGGTGAAAGATTCCTGGGAAGAGACATAACCTTCCAAAACACAGCCGGTCCCTCAAAGCACCAAGCGGTTGCCCTGAGAGTTGGAGCTGACCTCTCAGCATTCTACAGGTGCGACTTTCTTGCATACCAAGACACCCTTTACGTCCACAGCAACCGCCAATTCTTCAGCAACTGCTACATAGCAGGCTCCGTCGACTTCATATTCGGCAACTCTGCAGCCGTCATTCAGAACTCCGACATCCACGCAAGGCGTCCCAATCCTGGGCAGAAGAACATGGTGACCGCTCAGGGCCGCGTTGACCCCAACCAGAACACGGGCATTGTGATTCAGAAAAGCAGGATTGGTGCGACGAAGGACTTGGAATCTGTGAAGAAGAGCTTCCCCACGTTTCTGGGGAGGCCATGGAAGCAGTACTCTCGTACTGTGATCATGCAGTCAAGCATAAGTGATGTGATTGACCCTGCTGGGTGGCACGTGTGGGATGGGAACTTCGCTTTGAATACGTTGTTCTACGGGGAGTATCAGAACACTGGGCCTGGTGCTGCAACCTCAAGAAGGGTCACTTGGAAAGGGTTTAAGGTCATCACCAGTGCAGCTGAGGCCCAGAGTTTCACTCCTGCAAATTTCATTGCGGGTTCAAGCTGGTTGCCCTCCACTGGTTTTCCATTCTCTCTTGGCCTCTAG 1743 0.5359 MTNKIRQALPTISDALTKNKTKTTLLFALAATLFIALAVVAGVSSRKNSAHNASSTSSHAIIKSACSSTLYPELCLSSIASEPGKADKVSTHKNVIEQSLNITVGIVERNYFTVEKLLRKKGLTKRQKTALHDCLETIDETLDELHKAIDELKEYPSKKSLSHHAEDLKTLMSSAITNQETCLDGFSHDQADKRLRQHLQAGQVHAEHLCSNALAMTKNLTDNDMAMAMSNNVENERRKTMEDPHEIVWPHWISAADRRLLQTGTVKPDVVVAADGSGNFRTVSAAVAAAPEKSSKRYVIRIKAGVYRENVDVSKKKTNIMFLGDGRTNTIITASRNVVDGSTTFNSATVVVVGERFLGRDITFQNTAGPSKHQAVALRVGADLSAFYRCDFLAYQDTLYVHSNRQFFSNCYIAGSVDFIFGNSAAVIQNSDIHARRPNPGQKNMVTAQGRVDPNQNTGIVIQKSRIGATKDLESVKKSFPTFLGRPWKQYSRTVIMQSSISDVIDPAGWHVWDGNFALNTLFYGEYQNTGPGAATSRRVTWKGFKVITSAAEAQSFTPANFIAGSSWLPSTGFPFSLGL* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2702 580 TIGRFAM PME_inhib: pectinesterase inhibitor domain 37 221 IPR006501 GO:0004857
Pvu9g2702 580 ProSitePatterns Pectinesterase signature 1. 294 313 IPR018040 -
Pvu9g2702 580 Pfam Pectinesterase 269 565 IPR000070 GO:0030599|GO:0042545
Pvu9g2702 580 ProSitePatterns Pectinesterase signature 2. 413 422 IPR033131 -
Pvu9g2702 580 Coils Coil 135 155 - -
Pvu9g2702 580 SMART PMEI_2 57 216 IPR006501 GO:0004857
Pvu9g2702 580 CDD PMEI-like_3 64 221 - -
Pvu9g2702 580 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 61 221 IPR035513 -
Pvu9g2702 580 Pfam Plant invertase/pectin methylesterase inhibitor 61 216 IPR006501 GO:0004857
Pvu9g2702 580 PANTHER PECTINESTERASE 23 579 - -
Pvu9g2702 580 Gene3D - 263 580 IPR012334 -
Pvu9g2702 580 SUPERFAMILY Pectin lyase-like 265 579 IPR011050 -
Pvu9g2702 580 PANTHER PECTINESTERASE 23 579 - -
Pvu9g2702 580 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 222 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2702 Pvu-Chr9 37347937 37350658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2702 55 580 Carbohydrate Esterase AT3G14310 68.877 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2702 K01051 - jre:109013060 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2702 9 37347937 37350658 Pvu10g1282 10 39313000 39323526 PCT