Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2699 ATGAATGAGCCAACTGACACTCTGGGTGAATCCCCCGCCGTCGAGTTAATCGGAAAGATAATGATAATCGTTATAGTGTTCTTCTTCTTCCTTGTTGTAATTGCTCTCGGCATTCATCTCTTCACCAGAAACTTCTGGTGGCGCAACCCTGCTCCCCAATCTCAGCGCCGCCGCCGCCGCTTTGTGTTTTCCTCCGGCCAAGAGGGTGGTCTCCGAAGCGGACTGGATCCCTCCGTGCTGAGCTCCATACCCGTGTTGGTGTTCCAAGGGCAAGACTTCAAGGACGGTTTGGAATGTGCGGTTTGCCTCTCGGAGGTCGTGGAAGGAGAAAAGGCGAGGCTTTTGCCCAAATGCAATCATGGGTTTCACGTTGGTTGCATTGACATGTGGTTCCAGTCCCATTCTACCTGCCCTCTTTGCAGAAACTCTGTTGCTGTTCAATCCGATGAAAGTAGCTCAGAATCAGAGTCTCCAACTTTTCCCACTAACGTTTTGGTTTGGGGGGATCACACTCAGATAACTTCTACAGGTGGTGCTTCTTTGGAGGAAGGTGCTTCTCTGCCACCTTGCCCCTCCTCATCCTCTTCTTCTGCTACTTGTGATGATGATAGTAACAACAACAGCAGCAATAGACGTCACGGAACCTTGGTGATTGACATACCAAGTGATGTCACTTCGACTTCTGCAAGCAGGTTTGGTGAAGATGACTTGAAATCGCCAATGACAGGAAGACTGAGGTCATTGAAGAGGCTTTTGAGCAGGGACAGAAGGTTAAACCCTTGGAGTCCTACTTCTGTAGATGTAGAACAAGCAGCTAATTCAGGAGGAGGAGGAGGACAGAGTTGA 846 0.4953 MNEPTDTLGESPAVELIGKIMIIVIVFFFFLVVIALGIHLFTRNFWWRNPAPQSQRRRRRFVFSSGQEGGLRSGLDPSVLSSIPVLVFQGQDFKDGLECAVCLSEVVEGEKARLLPKCNHGFHVGCIDMWFQSHSTCPLCRNSVAVQSDESSSESESPTFPTNVLVWGDHTQITSTGGASLEEGASLPPCPSSSSSSATCDDDSNNNSSNRRHGTLVIDIPSDVTSTSASRFGEDDLKSPMTGRLRSLKRLLSRDRRLNPWSPTSVDVEQAANSGGGGGQS* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2699 281 Pfam Ring finger domain 98 141 IPR001841 -
Pvu9g2699 281 MobiDBLite consensus disorder prediction 258 281 - -
Pvu9g2699 281 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Pvu9g2699 281 PANTHER RING-H2 FINGER PROTEIN ATL3 5 269 - -
Pvu9g2699 281 CDD RING-H2_EL5_like 98 141 - -
Pvu9g2699 281 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 151 IPR013083 -
Pvu9g2699 281 SUPERFAMILY RING/U-box 79 147 - -
Pvu9g2699 281 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 5 269 IPR044675 -
Pvu9g2699 281 SMART ring_2 99 140 IPR001841 -
Pvu9g2699 281 MobiDBLite consensus disorder prediction 237 256 - -
Pvu9g2699 281 MobiDBLite consensus disorder prediction 175 233 - -
Pvu9g2699 281 MobiDBLite consensus disorder prediction 175 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2699 Pvu-Chr9 37333219 37335367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2699 15 259 C3H Transcription Factor Family AT1G53820 41.892 2.59e-63 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2699 - - gmx:100797420 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2699 9 37333219 37335367 Pvu10g1277 10 39266194 39267770 PCT