Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2698 ATGATCACCACCCTCATCTCCATGCTCACTGTCACAACCATTGTGCTTGTTTTGAAAATTCCAAGGTTGCTGCAGAACAATAAACTCTATAGAAGAAATTATAGTAAAGGAGATTGTTGTTCAGTGTGTCTCTGCCAAATCTCTGATGGAGGGAAGATAAGGACCTTACCGGGATGCCACCACAGTTTTCACCTTCATTGTATTGCTCCCTGGTTCAACAACCATTCTACCTGCCCTCTTTGCAGAAACAATATCACTCTCCTCGACAACAATCGCACACACTCTCTCCTTCATTTCTTCAGCACTTTCTCTGATATATTCATTGCTCTTCATTACTTGGTGCTTCTTCCTACAGCTACCAATCGTGACACTTTCCCCTTATTTCATTAA 390 0.4179 MITTLISMLTVTTIVLVLKIPRLLQNNKLYRRNYSKGDCCSVCLCQISDGGKIRTLPGCHHSFHLHCIAPWFNNHSTCPLCRNNITLLDNNRTHSLLHFFSTFSDIFIALHYLVLLPTATNRDTFPLFH* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2698 129 ProSiteProfiles Zinc finger RING-type profile. 40 82 IPR001841 -
Pvu9g2698 129 SMART ring_2 40 81 IPR001841 -
Pvu9g2698 129 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 31 86 IPR044675 -
Pvu9g2698 129 PANTHER RING-H2 FINGER PROTEIN ATL2 31 86 - -
Pvu9g2698 129 SUPERFAMILY RING/U-box 39 93 - -
Pvu9g2698 129 Pfam Ring finger domain 39 82 IPR001841 -
Pvu9g2698 129 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 18 91 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2698 Pvu-Chr9 37331882 37332577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2698 33 90 C3H Transcription Factor Family AT1G53820 48.276 4.10e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2698 - - pvu:PHAVU_009G261300g 277.33