Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2690 ATGCTATGCTACCTCCCATATTACCCCTTATGCCCCATTCCTTCTCTTCCTCAACTTTTAACAAGGAAGGACCTTAAAGACTCCATTTTTTCCTTCTGGGGATTCGTTCTGATGAGAGCTCCCAGTCCCAGAGGAGGACCAACCCCATCAACATCAAAACCAACACCACCCTCTTCCATCTACATGATTTCCAATTTAATGGTCTTTGTCACAGTACTGTTTCTTCTCTCTTCGTTCCTTCTTCCTGTTCAAGCCGCCTCCTGTAACCAACTGGATAGAGACTCACTCTTGGCCTTCTCCAGGAACATATCCACTCCTTCTCCTCTCAATTGGTCTTCTTCTGTTGATTGTTGTCTGTGGGAAGGCATTCTTTGTGATGAGGATTTCAGAGTCATACAGCTTTTGCTACCTTCCAGGGGTCTCGCTGGCTTCATCTTCCCATCTCTCACAAATCTCACTGCTCTCTCCCACCTTGATCTATCCCATAACCGCTTATCCGGTAATCTCCCAAACCAATTTTTCTCTCTTCTTAATCACCTGCAGAATCTTGATTTAAGCTACAATCGTCTCTCTGGTGAATTGCCACACTTTGTTGCTAATACCAGTGGCAATACTCTACTGAAGCTTGATCTGTCAAGTAATTTATTCCACGGAAAACTCCCACTTTCTCTCCTTCAGCACCTGGGAGATGCAGTCGCAGGAGGGAGTTTGACATCTTTTAATGTTAGTAACAACAGCTTCACGGGTCAAATTCCCACTTCTCTCCTCTGTAGTAACCACAGTAGCTCCTCCTCTCTCAGATTCTTGGATTATTCCTCCAATGATTTCTCTGGCATGATTCAGCCAGGATTAGGAGCATGTTCCAAGCTGGAGAAATTTCGAGCAGGCTCCAATTCACTATCCGGGCCCCTCCCTGATGATATTTTCAATGCTGTTGCTCTCAAAGAAATCTCCTTGCCCCTCAATAAACTCAGTGGAACCCTTGAGGGCATTGTTAACCTTGCCAACCTCACAGTTCTGGAGCTCTACTCCAATAATTTCACCGGGCCTCTTCCCTCGGATATTGGTAAGCTCTCCAAATTGGAACGTTTACTCCTTCATGCCAACAAAATAAATGGTACTCTGCCCCCATCTCTAATGGAGTGTGTCAACCTTGTGATGTTGGATGTAAGGCTCAACTTGTTGGAGGGAAGCCTCTCAGAATTGAATTTCTCTGGACTCCTCAGACTCTCAGCACTTGACCTTGGCAACAATAGTTTTACTGGTATTATACCACCAACCATGTATGCCTGTAAATCACTTAAAGCAGTAAGGCTAGCATCTAACCAGTTTGAGGGACAGATCTCAGCTGACATACTTGAACTGCAGTCTCTGGCTTTCCTATCAATTTCTACCAACAACCTCAGTAATGTCACTGGGGCACTGAGTTTGCTTATGGGACTCAAGAACCTTAGCACTCTTATGCTCTCCCAGAATTTTTTCAATGAAATGATGCCACATGATGTCAACGTAACAAACCCAGATGGATTCCAAGGGATCCAAGTTCTTGGTTTGGGCGGTTGTAATTTCACAGGCCAAGTACCACACTGGCTTTATAACCTGAAGAAGCTGGAGGTCTTGGATTTGTCCTATAATCAAATAAGTGGTTCAATTCCTCCTTGGCTGCACACACTTCCTGAGCTTTTCTACGTAGACTTGTCTTTTAACCTCCTCACAGGAATGTTTCCAGTTGAGCTCACAACGCTTCCAGCACTAACTTCACAAAAGGCCTATGACGAAGTAGAAAGGACTTATCTGGAGTTACCCGTGTTTGCTAATGCCAACAATGTTTCTCAGATGCAATATAATCAGATTTCCAACCTACCACCAGCAATATATCTTGGAAACAATAGCCTCAATGGCAGTATCCCTGTGGAGATTGGCAAACTGAAAGTTCTTCATCAGCTGGACCTTAGTAACAACAATTTCTCTGGCAATATCCCACCGGAGATTTCTAACTTGATTAACCTAGAGAAACTATACCTCTCAGGAAACCAACTTTCCGGTGAAATTCCTGTTTCACTCAAAAACTTGCATTTTTTGTCTGCTTTCAGTGTAGCATACAATAATCTTCAAGGGCCCATACCCACTGGTAGTCAATTTGATACTTTCTCCTCTTCCAGCTTCGAAGGCAACCCACAGTTGTGTGGTGCAGTTGTTCGGCGCTCTTGTGTTCCTCAACAGGGTACTACTGCACGTGGTCACAGCTCAAACAAAAAATTGATCATTGGATTTGCCATTGCAGCCAGTTTTGGCATTGTTTCCTTGGTTTCAGTGTTGATAGTGTGGGTAATATCCAAGAGGAGGATCACTCCTGGTGGAGACGCTGACAAGATTGAACTAGAATCGATTTCTATCAACTCTTACAGTGGGGTTCATCCTGAGGTTGACAAAGAGGCTAGCCAAGTGGTACTGTTCCCTAATAAAACAAGTGAAATCAAGGACCTTACCATCGTTGAAATATTAAAAGCTACTGAAAACTTCAGTCAGGCAAACATAATAGGATGTGGGGGTTTTGGTTTGGTTTATAAAGCAACATTACCCAATGGCACTGCTCTGGCCATCAAGAAACTTTCAGGAGATTTGGGTATTATGGAAAGGGAATTTAAAGCAGAAGTAGAGGCTTTGTCTACAGCACAGCATGAAAATCTGGTTGCACTGCAAGGCTACTGTGTGCATGAGGGTGTTCGGCTTCTCATATACTCCTACATGGAAAATGGAAGTCTGGATTACTGGTTGCATGAGAAGGCTGATGGTCCATCTCAGATTGATTGGCCTACTCGACTGAAGATTGCACAAGGTGCAAGTTTTGGATTGGCTTACATGCATCAAATATGTGACCCACATATAGTGCATCGTGATATAAAGTCGAGCAATATACTTCTTGATGAAAAGTTTGAGGCACATGTTGCTGATTTTGGGCTGGCTCGACTCATTCTTCCTTATCATACTCATGTTACAACTGAACTTGTAGGTACATTAGGTTACATACCCCCAGAGTATGGACAAGCATGGGTGGCAACTCTGAGAGGAGATGTGTACAGCTTTGGGGTTGTCATGCTTGAGCTGCTAACGGGGAGGAGGCCTGTGGATGTAAGCAAGCCAAAAATGTCAAGGGAGTTAGTTTCCTGGGTTCAACATATGAGGAGTGAAGGAAAACAAGATCAAGTCTTTGATCCATTTATGAGAGGCAAGGGCTTTGAAGAAGAGATGCTGCAGGTTCTTGATGTAGCCTGCATGTGTGTCAACCACAATCCTTTCAAGAGACCGAGCATCAGAGAGGTTGTTGAATGGCTGAGGAATGTAGCATTATCCAACCAGCAATTGAATAAAGACTAG 3378 0.4384 MLCYLPYYPLCPIPSLPQLLTRKDLKDSIFSFWGFVLMRAPSPRGGPTPSTSKPTPPSSIYMISNLMVFVTVLFLLSSFLLPVQAASCNQLDRDSLLAFSRNISTPSPLNWSSSVDCCLWEGILCDEDFRVIQLLLPSRGLAGFIFPSLTNLTALSHLDLSHNRLSGNLPNQFFSLLNHLQNLDLSYNRLSGELPHFVANTSGNTLLKLDLSSNLFHGKLPLSLLQHLGDAVAGGSLTSFNVSNNSFTGQIPTSLLCSNHSSSSSLRFLDYSSNDFSGMIQPGLGACSKLEKFRAGSNSLSGPLPDDIFNAVALKEISLPLNKLSGTLEGIVNLANLTVLELYSNNFTGPLPSDIGKLSKLERLLLHANKINGTLPPSLMECVNLVMLDVRLNLLEGSLSELNFSGLLRLSALDLGNNSFTGIIPPTMYACKSLKAVRLASNQFEGQISADILELQSLAFLSISTNNLSNVTGALSLLMGLKNLSTLMLSQNFFNEMMPHDVNVTNPDGFQGIQVLGLGGCNFTGQVPHWLYNLKKLEVLDLSYNQISGSIPPWLHTLPELFYVDLSFNLLTGMFPVELTTLPALTSQKAYDEVERTYLELPVFANANNVSQMQYNQISNLPPAIYLGNNSLNGSIPVEIGKLKVLHQLDLSNNNFSGNIPPEISNLINLEKLYLSGNQLSGEIPVSLKNLHFLSAFSVAYNNLQGPIPTGSQFDTFSSSSFEGNPQLCGAVVRRSCVPQQGTTARGHSSNKKLIIGFAIAASFGIVSLVSVLIVWVISKRRITPGGDADKIELESISINSYSGVHPEVDKEASQVVLFPNKTSEIKDLTIVEILKATENFSQANIIGCGGFGLVYKATLPNGTALAIKKLSGDLGIMEREFKAEVEALSTAQHENLVALQGYCVHEGVRLLIYSYMENGSLDYWLHEKADGPSQIDWPTRLKIAQGASFGLAYMHQICDPHIVHRDIKSSNILLDEKFEAHVADFGLARLILPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPVDVSKPKMSRELVSWVQHMRSEGKQDQVFDPFMRGKGFEEEMLQVLDVACMCVNHNPFKRPSIREVVEWLRNVALSNQQLNKD* 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2690 1125 ProSitePatterns Protein kinases ATP-binding region signature. 847 870 IPR017441 GO:0005524
Pvu9g2690 1125 Gene3D Ribonuclease Inhibitor 89 231 IPR032675 -
Pvu9g2690 1125 Gene3D Ribonuclease Inhibitor 405 744 IPR032675 -
Pvu9g2690 1125 Gene3D Phosphorylase Kinase; domain 1 803 916 - -
Pvu9g2690 1125 Pfam Leucine rich repeat 513 571 IPR001611 GO:0005515
Pvu9g2690 1125 ProSiteProfiles Leucine-rich repeat profile. 536 559 IPR001611 GO:0005515
Pvu9g2690 1125 ProSitePatterns Serine/Threonine protein kinases active-site signature. 963 975 IPR008271 GO:0004672|GO:0006468
Pvu9g2690 1125 PANTHER OS02G0155400 PROTEIN 69 1113 - -
Pvu9g2690 1125 Pfam Leucine rich repeat N-terminal domain 92 126 IPR013210 -
Pvu9g2690 1125 SUPERFAMILY L domain-like 268 726 - -
Pvu9g2690 1125 Pfam Protein kinase domain 842 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2690 1125 Pfam Leucine Rich Repeat 669 691 IPR001611 GO:0005515
Pvu9g2690 1125 ProSiteProfiles Leucine-rich repeat profile. 669 692 IPR001611 GO:0005515
Pvu9g2690 1125 Gene3D Ribonuclease Inhibitor 330 404 IPR032675 -
Pvu9g2690 1125 Gene3D Ribonuclease Inhibitor 232 329 IPR032675 -
Pvu9g2690 1125 SUPERFAMILY L domain-like 93 348 - -
Pvu9g2690 1125 SUPERFAMILY Protein kinase-like (PK-like) 820 1112 IPR011009 -
Pvu9g2690 1125 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 69 1113 - -
Pvu9g2690 1125 SMART LRR_typ_2 358 382 IPR003591 -
Pvu9g2690 1125 SMART LRR_typ_2 667 690 IPR003591 -
Pvu9g2690 1125 SMART LRR_typ_2 481 504 IPR003591 -
Pvu9g2690 1125 SMART LRR_typ_2 534 558 IPR003591 -
Pvu9g2690 1125 SMART LRR_typ_2 455 477 IPR003591 -
Pvu9g2690 1125 SMART LRR_typ_2 407 431 IPR003591 -
Pvu9g2690 1125 SMART LRR_typ_2 643 666 IPR003591 -
Pvu9g2690 1125 SMART LRR_typ_2 152 176 IPR003591 -
Pvu9g2690 1125 SMART LRR_typ_2 177 201 IPR003591 -
Pvu9g2690 1125 SMART LRR_typ_2 334 357 IPR003591 -
Pvu9g2690 1125 PRINTS Leucine-rich repeat signature 155 168 - -
Pvu9g2690 1125 PRINTS Leucine-rich repeat signature 534 547 - -
Pvu9g2690 1125 SMART LRR_sd22_2 534 549 - -
Pvu9g2690 1125 SMART LRR_sd22_2 152 171 - -
Pvu9g2690 1125 SMART LRR_sd22_2 177 196 - -
Pvu9g2690 1125 SMART LRR_sd22_2 667 693 - -
Pvu9g2690 1125 Gene3D Transferase(Phosphotransferase) domain 1 917 1125 - -
Pvu9g2690 1125 ProSiteProfiles Protein kinase domain profile. 841 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2690 1125 SMART serkin_6 841 1112 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2690 Pvu-Chr9 37289493 37293433 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2690 38 775 Miscellaneous Gene Families AT1G17240 50.067 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pvu9g2690 Pkinase 1.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2690 - - gmx:100782574 1846.63