Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2687 ATGGCTTCCGCTTGTGCCTCTTCTGCCATTGCTGCTGTTTCCATCTCCACGCCAAGTTCCCAGAAGAATGGATCAGCCTTGGGAACTCCCAAAGCTTCTTTTCTTGGTGGAAGGAAATTGAGGGTGAACAAATACACAGCAGCAGTTGGAGGACGATCCAGCACTACAGTGTGTGCAGTAGCCGAGCCCGACAGGCCCCTATGGTTTCCTGGCAGCACACCTCCTCCATGGCTTGATGGCACTCTCCCTGGAGACTTTGGCTTTGACCCTCTTGGTCTTGGATCTGATCCTGAGAGTCTGAGGTGGAATGTTCAGGCAGAGATAGTGCACTGCAGATGGGCAATGTTGGGTGCTGCTGGGATTTTCATTCCAGAGTTTCTGACAAAGATTGGTGTCTTAAACACTCCCTCATGGTACTCAGCTGGAGAACAGGAATACTTCACAGACACCACTACCCTCTTCATTGTTGAGCTCTTTTTCATTGGGTGGGCTGAGGGTAGAAGATGGGCTGACATAATCAAGCCAGGGTGTGTCAACACTGACCCCATCTTTCCCAACAACAAGCTCACAGGAACTGATGTTGGTTACCCAGGTGGGCTTTGGTTTGACCCCCTTGGATGGGGAAGTGGCTCTCCCCAGAAGATCAAGGAGTTGAGAACTAAGGAGATCAAGAATGGTAGATTGGCCATGTTGGCTGTGATGGGTGCATGGTTCCAGCATATATATACTGGCACTGGTCCTATTGACAACCTCTTTGCCCACCTTTCAGATCCTGGCCATGCTACCATTTTTGCTGCTTTCACCCCCAAGTGA 813 0.5043 MASACASSAIAAVSISTPSSQKNGSALGTPKASFLGGRKLRVNKYTAAVGGRSSTTVCAVAEPDRPLWFPGSTPPPWLDGTLPGDFGFDPLGLGSDPESLRWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYSAGEQEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLSDPGHATIFAAFTPK* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2687 270 Pfam Chlorophyll A-B binding protein 74 240 IPR022796 -
Pvu9g2687 270 Gene3D Chlorophyll a/b binding protein domain 75 260 - -
Pvu9g2687 270 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 270 - -
Pvu9g2687 270 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 270 IPR001344 GO:0009765|GO:0016020
Pvu9g2687 270 SUPERFAMILY Chlorophyll a-b binding protein 62 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2687 Pvu-Chr9 37274635 37276311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2687 52 270 Chloroplast and Mitochondria Gene Families AT3G61470 89.091 8.66e-148 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2687 K08908 - gmx:100784089 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2687 9 37274635 37276311 Pvu10g1265 10 39161195 39162986 PCT