Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2683 ATGTCACGTATTCTCCTCCTGAGTTTTGTTGGACTTCTGGTGTGCTTCCCATTTTCTTGTTCCCTCCAAGAGCAAGGGAAAGAGCTACAAACCCCTTTGCATCCAAACTCTTGCAATGAAACATGCGGGAACCTCCATGTTCCCTTTCCATTCTATGTCAACTCCTCTTGTGAGTCAATTTCCCCTGCCTTCCATCTCTCGTGCATAAACTCCACCACCCTTTTGCTCAGAATTGGCTCAGTGAGTTACACAGTCTTGGAATTCTTCTCAGATGGTGTGCTGGTGGACTTTCCCGGCTCATCATCCTGCAGACAGTACAATGACTTGAATTCTTTTGGCAGAAGCTTTGCAGGGAAGAACAACTTTGGAGTTTCGGTTGACAATGTTGTTGGTCTCTATGACTGTGAGGATTCCTCTCTGTGCAAAGCAGATTGTGAAACTATTGACTTGCCTGGTTGTGATGGAAGGGGAGGAGGCTCCCTTGCCTGCTGCTATCCCCTCTCAGACCATACCATATGGCATGTTGGTGATGGATTTTCGGTATTTTCTCAGTTTGGATGCAGGGGAGTTTCTAGTTGGGCCGTTTTGAGAGGCTCAACTTGGGGAAAACGTGGGGTGAAGTTGGAATGGGCACTGCCCAGAAACTCCTCTAAGCAAGTTTGTGCAAGGAATGCTAACATGGCCAATGCTACAGCAATCCAAGGAGGCGTGAGATGTGTCTGTCAAAATGGATATGTTGGTGATGGTTTTGCTGATGGAACTGGATGTTTGCAGGCCTGCATAAAGGACGGAAAGGAAGCATATGGAAGTGACTGCTACATCAAAAGACATGATCAGAGAAAATTTGTTATCATTGCCGGAATCATTGGCCCAGTTCTGATTGTTGCCTCCCTGGTTGCACTATTTTATCTTCTTAAAAGGCCAACAAAACCAGGGATGTTTGACACCGAGCAGGCTTACTATCAAAACATTTCAATCCCCAAAGCTTGTAAAATTCGACTGTTCAGCCTCCACGAGCTAGAGGAAGCCACAAAAGGCTTTGAAGAGAGTCAGAAACTCATGCATGCCAATAATGGGACAATTTTCGCTGGAGTTTTGAGGGATGGATCACACATAGCTGTTCACAAATTACAATGTGAGAAGAAAGACTTAATTCAAGTTCTGTCACAGATCGAGGTTCTGTCTTCTACTGTGCATAGAAACATGGCCCGCATTCTTGGTTGCTGTATTGAATCTGGCAACACTCTGGTAGTTTATGAGTTTCCTTGCAATGGTACTCTGGAGGAACATTTGCATCAAAGCAAAGGACAACAACTTCGTTTGGATTGGTATAGGAGATTGACTATCGCTGCAGAAACAGCTAGTATTCTTGCATTCCTACACTACGACAACTCTCCTCCCATATTTCACCATAACCTTAAATCTGCATGCATCTTCCTAGATGATGATTACTCTGTCAAGATTGCAGGATTTGGTCTGATCAACTCCAATGTTTACTATGATTCTCAGTTACATAAGAACTACGAAGGCTTTGGCATCTGCAAAAATGATGTTTATGACATGGGTGTGTTGCTTCTTGAAATTATCTCAGGCTCAAATCGCTTGGATTTACCAACTTCAGCCTTGCAGCAAATAAGGGCTGGAAAATTTGAAGAAATTTTTGACCCTTTTCTTTGCTATCATGAACAACCACATTATCGCCAAGAGCAAATGCAGATCATTGCTGATCTTGCTACAAGATGCCTTCTATTTGGTGTAGATGTAAGGCTAGGAATGGTTGATGTTGTGAGGGAGTTAGTGCACTTGACTAAAGAAAGTCTTGATGGGGGAATTACCAAAGGACCTGCACTTGAAGAGACTTTCTCAAACTCAAGCCTTCTTCAGATGATATCAATGTCTCCAGATTCTATGAGTGTCCCTTGA 1923 0.4353 MSRILLLSFVGLLVCFPFSCSLQEQGKELQTPLHPNSCNETCGNLHVPFPFYVNSSCESISPAFHLSCINSTTLLLRIGSVSYTVLEFFSDGVLVDFPGSSSCRQYNDLNSFGRSFAGKNNFGVSVDNVVGLYDCEDSSLCKADCETIDLPGCDGRGGGSLACCYPLSDHTIWHVGDGFSVFSQFGCRGVSSWAVLRGSTWGKRGVKLEWALPRNSSKQVCARNANMANATAIQGGVRCVCQNGYVGDGFADGTGCLQACIKDGKEAYGSDCYIKRHDQRKFVIIAGIIGPVLIVASLVALFYLLKRPTKPGMFDTEQAYYQNISIPKACKIRLFSLHELEEATKGFEESQKLMHANNGTIFAGVLRDGSHIAVHKLQCEKKDLIQVLSQIEVLSSTVHRNMARILGCCIESGNTLVVYEFPCNGTLEEHLHQSKGQQLRLDWYRRLTIAAETASILAFLHYDNSPPIFHHNLKSACIFLDDDYSVKIAGFGLINSNVYYDSQLHKNYEGFGICKNDVYDMGVLLLEIISGSNRLDLPTSALQQIRAGKFEEIFDPFLCYHEQPHYRQEQMQIIADLATRCLLFGVDVRLGMVDVVRELVHLTKESLDGGITKGPALEETFSNSSLLQMISMSPDSMSVP* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2683 640 Gene3D Phosphorylase Kinase; domain 1 314 421 - -
Pvu9g2683 640 SUPERFAMILY Protein kinase-like (PK-like) 329 599 IPR011009 -
Pvu9g2683 640 Pfam Wall-associated receptor kinase galacturonan-binding 38 88 IPR025287 GO:0030247
Pvu9g2683 640 PANTHER OS10G0351500 PROTEIN 47 635 - -
Pvu9g2683 640 ProSiteProfiles Protein kinase domain profile. 347 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2683 640 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 47 635 IPR045274 GO:0007166
Pvu9g2683 640 Pfam Protein tyrosine and serine/threonine kinase 350 506 IPR001245 GO:0004672|GO:0006468
Pvu9g2683 640 Gene3D Transferase(Phosphotransferase) domain 1 423 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2683 Pvu-Chr9 37218329 37221084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2683 38 602 Receptor kinase-like Gene Family AT2G23450 29.187 1.37e-58 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pvu9g2683 PK_Tyr_Ser-Thr 7.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2683 - - vra:106760020 1167.14