Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2680 ATGGCAAGCCTTCCAAATTCAAGGTTCAATGATGAAGAGAAGAGGAAGGAAGAACAACAAACACAAGATGAAGAAAGCTTCTCGCGTGCCATGCAGCTTGTGAGTTCGGTGGTTCTTTCCATGGCACTGCAATCGGCGACGGACCTGGGAGTGTTTCAGGTGCTCAAAGAAGCTGGAGAAGGTGCTAAGCTGTCTGCTAAGGAAATAGCATCAAAGATTAGTTGCAGTAACCCACAAGCAGCCTCAATGCTAGATCGTCTCCTCGCACTTCTTTCTTCTCACTCCATTCTTCACTCTTCCCTCGTTTCCGACCACCGTGTTCCTCCCTCCTTTCACCGCCTCTACACCATCACTCCCGTCGCCGCATTCTTTGCTCCCAATTCTGATGGAGTTTCGTTGGGACCCTTGATGGCCTTAGTCCAAGACAAAATCTTCCTACAAAGCTGGAGTGAGCTGAAAGATGCAACTAGGGAGGGGGGTATTCCATTCAATAGGGTTTATGGCACTCATGCTTTTGAGTATCCACGTTTGGACTCAAGATTCAACAAGGTTTTCAACACAGCTATGATCAATCACACCACTTTGGTGATGAAGAAGGTTCTGGAATCCTACAAAGGTTTTGAGGGCATAAAAAGAGTGGTGGATGTTGGTGGTGGTCTTGGAGTCAACATTAACTTGATCACTTCCAAATACCCTAATATCCATGGCATCAATTTCGACTTGCCTCATGTCATTCGAGATGCTCCTTCCTATCCTGGAGTGGAACATGTTGGGGGAGATATGTTTGAAAATGTGCCTAAAGGAGACGCCATATTTATGAAGTGGATACTTCATGATTGGAGTGATGAACATTGTCTAAAGTTGTTGAAGAATTGCTATGATGCAATTCCTGATGATGGAAAAGTGATAGTTGTGGAGGCAGTTCTTCCAAAGATAACAGAGACTAATAATGCTTATAAGGCGATTTCACAAATAGATGTTTTGATGATGACTCAGAACCCAGGAGGTAAAGAACGATCTGAAGAAGAGTTCATGAAATTGGCAAGAGAAGCTGGATTTAGTGGCATAAGATATGAATGTCATGTCAACATTTTCTGGATTATGGAGTTCTTCAAGTAG 1119 0.437 MASLPNSRFNDEEKRKEEQQTQDEESFSRAMQLVSSVVLSMALQSATDLGVFQVLKEAGEGAKLSAKEIASKISCSNPQAASMLDRLLALLSSHSILHSSLVSDHRVPPSFHRLYTITPVAAFFAPNSDGVSLGPLMALVQDKIFLQSWSELKDATREGGIPFNRVYGTHAFEYPRLDSRFNKVFNTAMINHTTLVMKKVLESYKGFEGIKRVVDVGGGLGVNINLITSKYPNIHGINFDLPHVIRDAPSYPGVEHVGGDMFENVPKGDAIFMKWILHDWSDEHCLKLLKNCYDAIPDDGKVIVVEAVLPKITETNNAYKAISQIDVLMMTQNPGGKERSEEEFMKLAREAGFSGIRYECHVNIFWIMEFFK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2680 372 MobiDBLite consensus disorder prediction 8 24 - -
Pvu9g2680 372 Pfam O-methyltransferase domain 149 354 IPR001077 GO:0008171
Pvu9g2680 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 370 IPR029063 -
Pvu9g2680 372 Gene3D - 7 124 IPR036388 -
Pvu9g2680 372 Gene3D Vaccinia Virus protein VP39 126 372 IPR029063 -
Pvu9g2680 372 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 8 372 - -
Pvu9g2680 372 SUPERFAMILY "Winged helix" DNA-binding domain 22 127 IPR036390 -
Pvu9g2680 372 PANTHER O-METHYLTRANSFERASE 8 372 IPR016461 GO:0008168
Pvu9g2680 372 PIRSF O-mtase 8 372 IPR016461 GO:0008168
Pvu9g2680 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 372 IPR016461 GO:0008168
Pvu9g2680 372 MobiDBLite consensus disorder prediction 1 26 - -
Pvu9g2680 372 Pfam Dimerisation domain 41 91 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2680 Pvu-Chr9 37177663 37180751 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2680 20 372 Monolignol Biosynthesis Gene Families AT5G54160 52.809 2.14e-140 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2680 K13066 - gmx:100803633 592.038