Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2678 ATGGCAAGCCTTCCAAATTCAAGGTTCAATGGTGAAGAGAAGAGGAAGGAACCAGAAGAAGTAGAAGATGAAGAAAGCTTCCTGCGTGCCGCACAGCTTACGAATTCCGTGGTCCTTTCGATGGCACTGCAAACGGCGACGGAGCTGGGTGTGTTTGAGGTGCTGATAGAAGCGGGAGAAGGTGCCAAGCTTTCTGCTAAGGAAATAGCATCAAAGATTAGTTGCATGGGAAAATTACCCGTTTTTCCCAACAGTAACCCACAAGCAGCCTCAATGCTACATCGTCTCCTCGCACTTCTTTCTTCTCACTCCATTCTTCACTCTTCTCTCATTTCCGACCACCGTGTTCCTCCCTCCTTTCACCGCCTCTACACCATCACTCCCGTGGCCGCATTCTTTGCTCCCAATTCTGATGGAGTTTCCTTGGGACCCTTGATGGCCTTATGCCAAGACAAAATCTTCCTACAAAGCTGGAGTGAGCTGAAAAATGCAATTAGGGAGGGGGGTGTTCCATTCAACAGGGTTTATGGCACTCATGCTTTTGACTATCCACGTTTGGACTCAAGATTCAATAAAGTTTTCAACACAGCAATGATGAATCACACCACTTTGGTGATGAAGAAGATTCTGCAATCCTACAAAGGTTTTGAGGGCATAAAAAGACTGGTAGATGTTGCTGGTGGTCTTGGAGTCAATATTAACTTGATCACTTCCAAATACCCTCATATCCATGGCATCAATTTTGACTTGCCTCATGTCATTCAAGATGCTCCTTCCTATCCTGGAGTAGAACATGTTGGGGGAGATATGTTTGAAAATGTGCCTAAAGGAGACGCCTTATTTATGAAGTGGATACTTCATGATTGGAGTGATGAACATTGTGTGAAACTGTTGAAGAATTGCTATGATGCAATTCCTGATGATGGAAAGGTGATAGTTGTGGAGGCAATTCTTCCAAAGATACCAGAGAATAATAATGCTTATAAGGCAATTTCACAAATGGATGTTTTGATGATGACTCAGAACCCAGGAGGTAAAGAACGATCTGAAGAAGAGTTCATGAAATTGGCAAGAGAAGCTGGATTTAGTGGCATCAAATATGAATGTCATGTGAATAATTTCTGGGTTATGGAGTTCTTCAAGTAG 1146 0.4328 MASLPNSRFNGEEKRKEPEEVEDEESFLRAAQLTNSVVLSMALQTATELGVFEVLIEAGEGAKLSAKEIASKISCMGKLPVFPNSNPQAASMLHRLLALLSSHSILHSSLISDHRVPPSFHRLYTITPVAAFFAPNSDGVSLGPLMALCQDKIFLQSWSELKNAIREGGVPFNRVYGTHAFDYPRLDSRFNKVFNTAMMNHTTLVMKKILQSYKGFEGIKRLVDVAGGLGVNINLITSKYPHIHGINFDLPHVIQDAPSYPGVEHVGGDMFENVPKGDALFMKWILHDWSDEHCVKLLKNCYDAIPDDGKVIVVEAILPKIPENNNAYKAISQMDVLMMTQNPGGKERSEEEFMKLAREAGFSGIKYECHVNNFWVMEFFK* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2678 381 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 5 381 - -
Pvu9g2678 381 SUPERFAMILY "Winged helix" DNA-binding domain 22 136 IPR036390 -
Pvu9g2678 381 Pfam O-methyltransferase domain 158 363 IPR001077 GO:0008171
Pvu9g2678 381 PIRSF O-mtase 8 381 IPR016461 GO:0008168
Pvu9g2678 381 Gene3D - 7 133 IPR036388 -
Pvu9g2678 381 MobiDBLite consensus disorder prediction 1 21 - -
Pvu9g2678 381 Pfam Dimerisation domain 41 100 IPR012967 GO:0046983
Pvu9g2678 381 Gene3D Vaccinia Virus protein VP39 135 381 IPR029063 -
Pvu9g2678 381 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 379 IPR029063 -
Pvu9g2678 381 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 381 IPR016461 GO:0008168
Pvu9g2678 381 PANTHER O-METHYLTRANSFERASE 5 381 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2678 Pvu-Chr9 37161111 37163251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2678 13 381 Monolignol Biosynthesis Gene Families AT5G54160 50.949 3.70e-138 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2678 K13066 - gmx:100803633 556.599