Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2672 ATGGCAAGCCTGAATGGTGAAGAAAAGAGGAAGGAAGAAGAGATACAAGATGCACAAAGCTTCTCGCATGCCATGGAGATTGTAGGTTCGGTGGCCCTTCCGATGGCAGTGCAATCGGCGACGGAGCTGGGAGTGTTTGAGGTGCTGAAAGAAGCGGGAGAAGGTGCTAAGCTGTCTGCTAAGGAAATAGCATCAAAGATTAGTTGCAGTAACCCAGAAGCAGCCTCAATGCTAGATCGTCTCCTCGCACTTCTTTCTTCTTACTCCATTCTTCACTCTTCCCTCATTTCCGACCACCGCGTTCCTCCCACCTTTCACCGGCTCTACAGCCTCACACCCGTCGCCGCATTCTTTGTTCCCAATTCTGATGGAGTTTCGTTGGGGCCCATGATGGCCTTATGCCAAGACAAAATCTTCCTACAAAGCTGGAGTGAGCTGAAAGATGCAATTAGGGAGGGAGGTATTCCATTCAACAGGGTTCATGGCACTCATGCTTTTGAGTATCCACGTTTGGACTCAAGATTCAATAAGGTTTTCAACACAGGAATGATCAATCACACCACTTTGGTGATGAAGAAGGTTCTGGAATCCTACGAAGGTTTTGAGGGCATAAAAACACTGGTGGATGTTGGTGGTGGTCTTGGAATCAACATTAACTTGATCACTTCTAAATACCCTCATATTCATGGCATCAATTTCGACTTGCCTCATGTCATTCAAGAGGCTCCTTCCTGTCCTGGAGTGGAACACGTTGAGGGAGACATGTTTGAAAGTGTGCCTAAAGGAGACGCCATATTTATGAAGTGGATACTTCATGATTGGAGTGATGAACATTGTGTGAAGCTGTTGAAGAATTGCTATGATGCAATTCCTGATGATGGAAAGGTGATAGTTGTGGAGTCAATTCTTCCAAAGTTACCAGAGACTAATAATGCTTATAAGGGGGTTGCACAAATGGATGTTGCGATGATGACTCAGAACCCAGGAGGTAAAGAGCGATGTGAAGAAGAGTTCATGAAATTGGCAACAACAGCTGGATTCAGTGGCATCAGATATGAATGTCGTGTCAACATTTTCTGGATTATGGAGTTCTTCAAGTAG 1101 0.4523 MASLNGEEKRKEEEIQDAQSFSHAMEIVGSVALPMAVQSATELGVFEVLKEAGEGAKLSAKEIASKISCSNPEAASMLDRLLALLSSYSILHSSLISDHRVPPTFHRLYSLTPVAAFFVPNSDGVSLGPMMALCQDKIFLQSWSELKDAIREGGIPFNRVHGTHAFEYPRLDSRFNKVFNTGMINHTTLVMKKVLESYEGFEGIKTLVDVGGGLGININLITSKYPHIHGINFDLPHVIQEAPSCPGVEHVEGDMFESVPKGDAIFMKWILHDWSDEHCVKLLKNCYDAIPDDGKVIVVESILPKLPETNNAYKGVAQMDVAMMTQNPGGKERCEEEFMKLATTAGFSGIRYECRVNIFWIMEFFK* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2672 366 SUPERFAMILY "Winged helix" DNA-binding domain 17 121 IPR036390 -
Pvu9g2672 366 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 3 366 - -
Pvu9g2672 366 Pfam O-methyltransferase domain 143 348 IPR001077 GO:0008171
Pvu9g2672 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 366 IPR016461 GO:0008168
Pvu9g2672 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 364 IPR029063 -
Pvu9g2672 366 Gene3D - 2 118 IPR036388 -
Pvu9g2672 366 PANTHER O-METHYLTRANSFERASE 3 366 IPR016461 GO:0008168
Pvu9g2672 366 Gene3D Vaccinia Virus protein VP39 120 366 IPR029063 -
Pvu9g2672 366 Pfam Dimerisation domain 35 85 IPR012967 GO:0046983
Pvu9g2672 366 PIRSF O-mtase 2 366 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2672 Pvu-Chr9 37099947 37103126 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2672 14 366 Monolignol Biosynthesis Gene Families AT5G54160 52.975 1.23e-137 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2672 K13066 - gmx:100803633 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2672 9 37099947 37103126 Pvu10g1252 10 38933092 38935310 PCT