Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2671 ATGGCAGAAACGTTGGAAACAGGTAGAGAAGTTGTGAATGGGAGAGAGGAGCATCATCTTAAACGGGAAGAAGAAGATGAGTTGACGTTTTGCATGGAAAAGATGGTTTCGTTTGTGGTTCCAATGGCTCTGAGGACATTGTTTGAGCTGGGGGTGTTTGATATCTTAGCCAAAAATGGTGGCAAACTCAGTGCAAAAGAGATTGCAGTTGAGATAGGTAGCAACAACCCTGAAGCTCCTGCAAT 245 0.4408 MAETLETGREVVNGREEHHLKREEEDELTFCMEKMVSFVVPMALRTLFELGVFDILAKNGGKLSAKEIAVEIGSNNPEAPA 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2671 81 SUPERFAMILY "Winged helix" DNA-binding domain 23 80 IPR036390 -
Pvu9g2671 81 MobiDBLite consensus disorder prediction 9 23 - -
Pvu9g2671 81 MobiDBLite consensus disorder prediction 1 23 - -
Pvu9g2671 81 Pfam Dimerisation domain 42 80 IPR012967 GO:0046983
Pvu9g2671 81 Gene3D - 9 81 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2671 Pvu-Chr9 37084693 37084937 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2671 24 80 Monolignol Biosynthesis Gene Families AT5G54160 40.351 1.98e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2671 - - pvu:PHAVU_009G2586000 157.532