Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2654 ATGGCTAGCAAAACAAAGATTTACATTGTTCTGGAGTTACTTGATGGGGGAGAGCTATTTGACAAAATAGCTGCAAAGGGGAGACTTAAAGAAGATGAAGCTAGAACTTATTTCCAACAACTTATTAATGCTGTTGACTACTGCCATAGTAGAGGCGTGTATCACAGAGATCTGAAGCCTGAGAATCTTCTTCTGGACTCGAACAGTGTTCTTAAAGTTTCAGATTTTGGATTGAGTACGTACTCGCAGAAAGACGATGAACTGCTCCACACTGCATGTGGAACCCCACATTATGTTGCTCCTGAGGTGATTCATAATAGAGGCTATGCTGGTTCAACATCTGACATCTGGTCTTGTGGAGTCATTCTCTTTGTACTTATGGCTGGGTTCTTGCCCTTTGATGGCCCAACTCATATGGCTCTGTTCAGGAAAATTATCAAGGCAGAATTCTCTTGTCCATCATGGTTTCCACCACAGGCAAAGGCACTGCTGAAACGCATTCTAGACCCAAACCCTCGAACGAGGATAAAAATTCCTGAGCTCTTAAAAGACGAGTGGTTCAAGAAAGGATACAAACCAACATGTTTCAGTGAGGAAGAGGACCTAAGTTTAGATGATGTAGCCGTCGCTTTCAACGAGTCTAATAAAAATCTAGGGACAGAAAAGAAAGTGAAACCCGTCCACATTAATGCTTTTGAGTTCATTTCTAGATCACAAAGTTTCAATCTTGACAACTTGCTCGAGATGCAAACGGATGAAGTGCAGCAAGAAACCTGTTTTACTTCACAGTGCCCTGCAAATGAAATTATGTGCAAAATCGAGGAAGCAGCCAAGCCACTGGGGTTTATTGTACAAAAGAAAAATTATAAGATGAAGCTGCAAGGTGACCACAATGGGAGGAAGGGTCACCTTTCAGTGGCTACTGAGGTTTTCGAAGTGGCTCCCTCAGTGCACATGGTGGAGCTGAGAAAGACAGGGGGTGATACACTAGAGTTTCATAAGTTCTTCAAAATCTTCTCGTCAGGGTTGCAAGACATTGTGTGGCATACTGAAGGAAAAAAATGA 1065 0.4244 MASKTKIYIVLELLDGGELFDKIAAKGRLKEDEARTYFQQLINAVDYCHSRGVYHRDLKPENLLLDSNSVLKVSDFGLSTYSQKDDELLHTACGTPHYVAPEVIHNRGYAGSTSDIWSCGVILFVLMAGFLPFDGPTHMALFRKIIKAEFSCPSWFPPQAKALLKRILDPNPRTRIKIPELLKDEWFKKGYKPTCFSEEEDLSLDDVAVAFNESNKNLGTEKKVKPVHINAFEFISRSQSFNLDNLLEMQTDEVQQETCFTSQCPANEIMCKIEEAAKPLGFIVQKKNYKMKLQGDHNGRKGHLSVATEVFEVAPSVHMVELRKTGGDTLEFHKFFKIFSSGLQDIVWHTEGKK* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2654 354 Pfam Protein kinase domain 2 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2654 354 PANTHER - 1 351 - -
Pvu9g2654 354 Gene3D Transferase(Phosphotransferase) domain 1 2 224 - -
Pvu9g2654 354 ProSiteProfiles Protein kinase domain profile. 1 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2654 354 SUPERFAMILY Protein kinase-like (PK-like) 4 200 IPR011009 -
Pvu9g2654 354 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 1 351 - -
Pvu9g2654 354 Pfam NAF domain 226 286 IPR004041 GO:0007165
Pvu9g2654 354 CDD CIPK_C 230 337 - -
Pvu9g2654 354 SMART serkin_6 1 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2654 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 53 65 IPR008271 GO:0004672|GO:0006468
Pvu9g2654 354 Gene3D Kinase associated domain 1, KA1 225 349 - -
Pvu9g2654 354 ProSiteProfiles NAF domain profile. 224 248 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2654 Pvu-Chr9 36987248 36994102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2654 1 352 CBL-interacting serine-threonine protein kinases AT1G01140 69.638 0.0 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pvu9g2654 Pkinase 3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2654 - - pvu:PHAVU_009G257000g 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2654 9 36987248 36994102 Pvu10g1233 10 38619152 38624851 PCT