Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2646 ATGAGAGTTTTGGAGGGTGCTTCTCTGGTTGAACTTGTCACTCATCTGAATATGGCTTTGCAGAAGTATGCTCCTTCTGGCCATGCACCTTCCATTAATATGAAACATTTGACCTTTTCCAGTAAGATGCCTAAGAAAGCTGAGCATGACAAGGCAAATCAGAATCATAACATGGATGTGGATATTGACCTTAGGGAAGTTTATTTTCTCATTATGCACTTTCTTTCAGCTGGGCCATGTCATAAAACTTATTTACAATTTTGGAATGAGCTTCTTGAGCATGAACTTTTGCCTAGAAGGTATCATGCGTGGTATTCAAAGACTGGAGCATGTAGTGGAGACAAAGATGATGATGGTCTATCATTCCCTTTAAATTACAATATGTTACTGGAGAGGTATCCACATATTGAAAAGGATCACCTGGTAAAGCTTTTAAAGCAATTGTTATTAAATACAGCCACCCCATCACTGGGTATGAATCTTGGAAATGCCCCAAATGCAGCTGATGTCCCTACACTTTTAGGAAGTGGTTCATTTTCACTGCTGAGCTATGATAGGGATAAAATGAAAGAAGTCAAACGGCCACCTCCTCACATGCGCTGGCCTCATATGAAAGCCAATCAGGTTCATGGGCTTAATTTGAGGGAAATAGGGGGTGGTTTCCCAAGACATCACCGTGCACCATCTATACGTTCTGCATGCTATGCCATTGCAAAACCTTCTACCATGGTGCAAAAGATGCAAAATATCAAGAGGTTAAGAGGACACCGCAATGCTGTTTATTGTGCTATATTTGATCGATCTGGAAGGCATGTGATTACTGGTTCAGATGACCGCCTTGTAAAGGTTTGGTCAATGGAAACTGCATATTGTTTGGCCAGTTGCCGTGGACATGATGGTGACATCACTGACTTGGCTGTGAGTTCAAACAATGCTTTAGTTGCATCCTCATCAAATGACTGTGTCATTCGAGTTTGGCGCTTGCCGGATGGGTTGCCAATATCAGTTTTGCGGGGACATACTGGAGCTGTTACAGCAATAGCATTTAGTCCCAGACCAAATGCTGTATACCAGCTTTTATCTTCCTCTGATGATGGAAGTTGTAGGATATGGGATGCAAGGTATACCCAGTCAAGTCCAAGATTATACATTCCGAGGCCTTCGGATTCTGTTATTGGGAAGAGCAATGGCCCATCTTCAAGTACTTTACCACAGAGCCATCAGATTTTTTGCTGTGCATTTAATGCTAATGGAACTGTCTTTGTAACTGGTAGCTCTGACAATCTTGCTAGGGTCTGGAATGCTTGTAAACTTAGCATGGATGACAGTGACCAACCAAATCATGAGATAGACGTGCTATCTGGGCATGAGAATGATGTGAATTATGTGCAATTCAGTGGATGTGCAGTCCCATCTCGGTTTTCCTCAACAGAAACTTGGAAGGAGGAAAATATTCCCAAATTTAAAAATTCTTGGTTGAATCATGACAACATAGTTACCTGCTCTCGTGATGGGAGTGCTATAATATGGATTCCTAGATCACGTAGATCACATGGAAAAAGTGGTCGCTGGACACGTGCATATCATCTAAGAGTTCCACCTCCACCTATGCCTCCTCAACCTCAAAGAGGTGGTCCTCGTCAGAGAATTCTACCAACTCCACGTGGTGTAAATATGATTGTTTGGAGCCATGACAACCGCTTTGTTCTTGCAGCTATTATGGATTGCAGAATTTGTGTTTGGAATGCATCTGACGGCAGCTTAGTACACTCATTGACTGGGCATACTGAATCTACATATGTTCTGGATGTTCATCCTTTCAATCCCCGGATAGCTATGAGTGCTGGATATGATGGAAGAACTATTGTTTGGGATATATGGGAGGGCATGCCTATCCGGATATATGAGATATCACGTTTCAAGTTGGTGGATGGAAAATTTTCTCCAGATGGAACATCAATTATACTTTCGGATGATGTTGGTCAACTATATATATTAAGCACAGGTCAAGGCGAGTCCCAGAAAGATGCCAAATACGATCAGTTCTTTCTCGGTGATTATCGACCTCTGATTCAAGACACCCATGGTAATGTACTAGACCAGGAAACTCAAATTGTTCCGTATCGACGGAATGTGCAAGATTTGCTTTGTGATTCAGCAATGATACCATACCCAGAGCCATATCAGAGTGAATTTCAGCAAAGAAGATTAGGAGCATTAGGCCTTGAGTGGCGTCCATCATCGCTAAGGCTTGCTGTTGGTCCTGATTTCAGTCTGGACCCTGATTATCACATGCTTCCATTGGCAGACTTGGATTTGGTTACAGAACCACTGCCTGAGTTTATAGATGCTATGGAATGGGAACCTGAAGTTGAGGTGTTTAGTGATGATGCAGATTCAGAATATAACGCCACTGAAGATTGCTCTTCTAAGGGTGAGAAAGGATGTTCAAGCTCCAATGCTTCTGGTGATTCAGGGTGCAGCACAGACAACAGCGAAGGGGAAGACACTCGCATGGAAAGCATTCGTAGATCGAAGAGGAAAAAACAGAAGACTGAGACTGAGATCATGACTTCTTCTGGGAGACGTGTGAAAAGGAGGAACTTTGATGAGTGTGATGGCAATACCATTGGCAGTAGCCGAAGTAGGAAGGGAAAAAGTGGCCAAAAAACATCAAGAAGGAAATTTTCGAAATCTAAATCTTCCCGGCCTCAAAGGGCTGCTGCACGCAATGCTCTGCATCTATTTTCCAAAATTACTGGTACACCAACAGATGGAGATGACGATAGTCTGATTGGTGATTTTTCAGATAGTGAATCAACATTGCAAGAGTCTAATATTGACAGTGATGAATCTGATGGAACTTTACAGAATGATCAATTGAATTATTCCAAGGGAAAAGAAGTATCCTATTATGAATCAGAGGACACAAAATCTCATGAGTTAACTGAAACTCATGTGAATTCAATGAACAAGAGGAGGTTGGTTCTGAAGTTGCCAATTCGTGATATATCTAAGTCCACAAATGAGTTTGATTACCAGGCTGAGTTGGCTGGCTCATCATCAAAAACTATACCAGAAGTTACTGATTTTAATGGGAACGGACCAAGTTTTAAGGATTCAGGGTACTATTCTGGCAGTACAAGTTACCCTGCAGTTGAAAGAACAGATCAAGCAAAACCTGGCCAGGTGAAAGACCATGTAGACTTGCTGGGGAAAATTAAATGGGGAGTGGTTAGGGCACGATCATCTAAACCGTTGAGAGTGGAAGAACCTGTACCATCAGAGGAAAATCCTTACTCTGGAAAATGTCCTAATCATCTTGATGAAAAAGAGAATGTAAGTAGTGGGAATGAGAAAGAGGAGAAGAACTTTAGTGCACCAACTCCTGAGTTTGAAACCCAAAATGATGGCAATCTGGGAGATGGTTTGATAGAGATTAATGAAATTTGTGCTGGTACTATCACCTCACAGCCTTTTAATCCCACTGTTAATGGAGGACAGATCACAGGTTCCAGCAATTGCAGGGACAAAGATGAATCACTGATTCCTACATATGTGATTCCCCAGGATACTGTTCCTGCTTCAATCAGCTATAGTGAGGTTGACCAACTACCTGAACCAAATATTGGTTTTTGTTCTGTTTCAACGAAACTAAGGTCGAAAAGGGGTGCAAGGGATCCTGAAAGTCCATCCAAGCATGAAGCAAAATCTTCCATTCTAAAGAATAGTGCGTGCAGCTCTAATGATAATGCTCCTTTGAACAATGAACAGCGTGTGCTTGTGGATAGCAACAACACTAGAGATAAATCTAATCTGGGAGAGAATGGATCTCAAGAAATAGATCCTCAGATTAGAGAAAATAGTACTTCTCAGGATTTGCTAGAACCACAAACACAAAGAGATAAAATGTATAAAGCGGTTTATAGAAGATCAAGATCACATAGGGCTGTGACTAATTTAGCTGACAGTGGTGGCCAGGGTGAATCTACTTCAAATGGGAGCAACAGTAATTTCAACACAACAGCAGACTTCAGTAATGGCACAAATGAGGCTAATCATACCAATGGATCCATAGAGTTGGAACCAATTAGTTGTGACCCAAACTATGAGCAGAATAATTGCAAAGTGCTGCAAGGACATGGAGATTCTATGATTAAAAGTCCACAGAATGTTTCTACAAGTGGAGGACAACTCACAGAAGAAGAAAGGGGTTCTAGTTCAAAATTGACTGTTGGTTTGAGGTCCACTAGGAGTCGGAGGTCTAGTTATAATATTCGTGAGACCAGTCCTGTAAATAAAAGGAAATCACTACAATCGACTGTGAAAGTATCATGGTTGTTGTTATCAACCCATGAAGAAGGATGCAGATATATTCCACAACAGGGAGATGAAGTTGTATATTTGAGACAGGGGCACCGGGAGTATATAGATTATTGTCGTAAAAGTGATTCAGGGCCTTGGGTATCACTTAAGGGACATATACGAGCTGTAGAATATTGTAGAGTTCAAAGCCTAGAGTATTCCCATCTTGCAGGGTCTGGTGATAGCTGCTGCAAAATGACCCTTCAGTTTGTAGATCCTAATTCAAGTGTTGTTGGAAAATCTTTTAAGTTAACCCTACCTGAAGTGACTAGTTTCCCAGATTTTCTTGTTGAAAGAACTAGGTTTGATGCTGCTATGCAAAGAAATTGGACACGCAGGGATAAATGCAGGGTTTGGTGGAGAAATGAGGATAATTCCTCTGGTAATTGGTGGGATGGTCGAATTTTGTGCGTGAAAACCAAGTCTTCTGAATTTTCAGACAGTCCATGGGAGAGTTGTACTGTTCGGTACAAGAATGACCTAACTGAAACGCATTTGCATAGTCCTTGGGAGCTTTTTGATGCTGACACTGTATGGGAACAGCCTCACATTGATGATAGCATGAAAAATAAACTGCAATCTGCTCTCACCAAATTACTGCAGTCAGGCAACACAGTCCAGGATCGTTATGGAGTGCATGAACTGAAGAAAATTTCAAGCAAGTCCAAATTTATAAACAGGTTTCCTGTTCCTATATCACTTGAATTGGTGCAGTCAAGGTTGAAGAACAATTACTACCGTAGTATGGAAGCTCTGCAGCACGATGTGACAAATTTACTGGCTAATTCCACTTCCTTTTTTGAAAAAGATGCAGATATGTCAGTAAAAATCAAACGTCTATCAGAATGGTTCACACGAACATTATCATCTCTATAG 5241 0.4137 MRVLEGASLVELVTHLNMALQKYAPSGHAPSINMKHLTFSSKMPKKAEHDKANQNHNMDVDIDLREVYFLIMHFLSAGPCHKTYLQFWNELLEHELLPRRYHAWYSKTGACSGDKDDDGLSFPLNYNMLLERYPHIEKDHLVKLLKQLLLNTATPSLGMNLGNAPNAADVPTLLGSGSFSLLSYDRDKMKEVKRPPPHMRWPHMKANQVHGLNLREIGGGFPRHHRAPSIRSACYAIAKPSTMVQKMQNIKRLRGHRNAVYCAIFDRSGRHVITGSDDRLVKVWSMETAYCLASCRGHDGDITDLAVSSNNALVASSSNDCVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGSCRIWDARYTQSSPRLYIPRPSDSVIGKSNGPSSSTLPQSHQIFCCAFNANGTVFVTGSSDNLARVWNACKLSMDDSDQPNHEIDVLSGHENDVNYVQFSGCAVPSRFSSTETWKEENIPKFKNSWLNHDNIVTCSRDGSAIIWIPRSRRSHGKSGRWTRAYHLRVPPPPMPPQPQRGGPRQRILPTPRGVNMIVWSHDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGMPIRIYEISRFKLVDGKFSPDGTSIILSDDVGQLYILSTGQGESQKDAKYDQFFLGDYRPLIQDTHGNVLDQETQIVPYRRNVQDLLCDSAMIPYPEPYQSEFQQRRLGALGLEWRPSSLRLAVGPDFSLDPDYHMLPLADLDLVTEPLPEFIDAMEWEPEVEVFSDDADSEYNATEDCSSKGEKGCSSSNASGDSGCSTDNSEGEDTRMESIRRSKRKKQKTETEIMTSSGRRVKRRNFDECDGNTIGSSRSRKGKSGQKTSRRKFSKSKSSRPQRAAARNALHLFSKITGTPTDGDDDSLIGDFSDSESTLQESNIDSDESDGTLQNDQLNYSKGKEVSYYESEDTKSHELTETHVNSMNKRRLVLKLPIRDISKSTNEFDYQAELAGSSSKTIPEVTDFNGNGPSFKDSGYYSGSTSYPAVERTDQAKPGQVKDHVDLLGKIKWGVVRARSSKPLRVEEPVPSEENPYSGKCPNHLDEKENVSSGNEKEEKNFSAPTPEFETQNDGNLGDGLIEINEICAGTITSQPFNPTVNGGQITGSSNCRDKDESLIPTYVIPQDTVPASISYSEVDQLPEPNIGFCSVSTKLRSKRGARDPESPSKHEAKSSILKNSACSSNDNAPLNNEQRVLVDSNNTRDKSNLGENGSQEIDPQIRENSTSQDLLEPQTQRDKMYKAVYRRSRSHRAVTNLADSGGQGESTSNGSNSNFNTTADFSNGTNEANHTNGSIELEPISCDPNYEQNNCKVLQGHGDSMIKSPQNVSTSGGQLTEEERGSSSKLTVGLRSTRSRRSSYNIRETSPVNKRKSLQSTVKVSWLLLSTHEEGCRYIPQQGDEVVYLRQGHREYIDYCRKSDSGPWVSLKGHIRAVEYCRVQSLEYSHLAGSGDSCCKMTLQFVDPNSSVVGKSFKLTLPEVTSFPDFLVERTRFDAAMQRNWTRRDKCRVWWRNEDNSSGNWWDGRILCVKTKSSEFSDSPWESCTVRYKNDLTETHLHSPWELFDADTVWEQPHIDDSMKNKLQSALTKLLQSGNTVQDRYGVHELKKISSKSKFINRFPVPISLELVQSRLKNNYYRSMEALQHDVTNLLANSTSFFEKDADMSVKIKRLSEWFTRTLSSL* 1747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2646 1746 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 295 328 - -
Pvu9g2646 1746 MobiDBLite consensus disorder prediction 935 962 - -
Pvu9g2646 1746 Pfam Bromodomain 1682 1731 IPR001487 GO:0005515
Pvu9g2646 1746 MobiDBLite consensus disorder prediction 886 901 - -
Pvu9g2646 1746 MobiDBLite consensus disorder prediction 1318 1360 - -
Pvu9g2646 1746 CDD Bromo_WDR9_I_like 1618 1746 - -
Pvu9g2646 1746 PANTHER WD REPEAT DOMAIN 9 26 1746 - -
Pvu9g2646 1746 MobiDBLite consensus disorder prediction 1381 1424 - -
Pvu9g2646 1746 Gene3D - 1640 1746 IPR036427 GO:0005515
Pvu9g2646 1746 ProSiteProfiles Trp-Asp (WD) repeats profile. 337 381 IPR001680 GO:0005515
Pvu9g2646 1746 MobiDBLite consensus disorder prediction 795 962 - -
Pvu9g2646 1746 MobiDBLite consensus disorder prediction 831 872 - -
Pvu9g2646 1746 ProSiteProfiles Trp-Asp (WD) repeats profile. 253 294 IPR001680 GO:0005515
Pvu9g2646 1746 MobiDBLite consensus disorder prediction 1237 1298 - -
Pvu9g2646 1746 SMART WD40_4 446 511 IPR001680 GO:0005515
Pvu9g2646 1746 SMART WD40_4 544 582 IPR001680 GO:0005515
Pvu9g2646 1746 SMART WD40_4 288 327 IPR001680 GO:0005515
Pvu9g2646 1746 SMART WD40_4 396 434 IPR001680 GO:0005515
Pvu9g2646 1746 SMART WD40_4 330 372 IPR001680 GO:0005515
Pvu9g2646 1746 SMART WD40_4 246 285 IPR001680 GO:0005515
Pvu9g2646 1746 SMART WD40_4 585 625 IPR001680 GO:0005515
Pvu9g2646 1746 MobiDBLite consensus disorder prediction 1084 1137 - -
Pvu9g2646 1746 Gene3D - 402 468 IPR015943 GO:0005515
Pvu9g2646 1746 ProSiteProfiles Trp-Asp (WD) repeats profile. 592 626 IPR001680 GO:0005515
Pvu9g2646 1746 MobiDBLite consensus disorder prediction 1103 1127 - -
Pvu9g2646 1746 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 253 288 - -
Pvu9g2646 1746 Pfam WD domain, G-beta repeat 291 326 IPR001680 GO:0005515
Pvu9g2646 1746 Pfam WD domain, G-beta repeat 406 434 IPR001680 GO:0005515
Pvu9g2646 1746 Pfam WD domain, G-beta repeat 248 285 IPR001680 GO:0005515
Pvu9g2646 1746 Pfam WD domain, G-beta repeat 333 372 IPR001680 GO:0005515
Pvu9g2646 1746 Pfam WD domain, G-beta repeat 586 625 IPR001680 GO:0005515
Pvu9g2646 1746 PANTHER PH-INTERACTING PROTEIN-LIKE ISOFORM X1 26 1746 - -
Pvu9g2646 1746 MobiDBLite consensus disorder prediction 810 830 - -
Pvu9g2646 1746 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 337 372 - -
Pvu9g2646 1746 ProSiteProfiles Trp-Asp (WD) repeats profile. 402 434 IPR001680 GO:0005515
Pvu9g2646 1746 Gene3D - 488 683 IPR015943 GO:0005515
Pvu9g2646 1746 ProSitePatterns Trp-Asp (WD) repeats signature. 612 626 IPR019775 -
Pvu9g2646 1746 SUPERFAMILY WD40 repeat-like 244 668 IPR036322 GO:0005515
Pvu9g2646 1746 CDD WD40 249 625 - -
Pvu9g2646 1746 ProSiteProfiles Trp-Asp (WD) repeats profile. 295 336 IPR001680 GO:0005515
Pvu9g2646 1746 MobiDBLite consensus disorder prediction 1220 1236 - -
Pvu9g2646 1746 MobiDBLite consensus disorder prediction 1219 1360 - -
Pvu9g2646 1746 SUPERFAMILY Bromodomain 1682 1744 IPR036427 GO:0005515
Pvu9g2646 1746 Gene3D - 224 401 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2646 Pvu-Chr9 36906228 36927937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2646 221 440 Eukaryotic Initiation Factors Gene Family AT2G46290 25.751 6.19e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2646 K11797 - gmx:100818665 3098.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2646 9 36906228 36927937 Pvu9g2646 9 36906228 36927937 ECH