Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2623 ATGAGTGGTGCATCAGAAAACCCTATTCATGAGAGTAATGAAGGTACAGCGTCTTCTTCTTCTTCTTCTTATTCCTCTTCATCATCAACAACACTGAAACTCTTCGGTTTTCCATTAACCCCACCAAGCAGCACTGTTTCTCCTCATTGCCCTCACAAGAGATTCAAGTGCCACTTCTGCTACCGTGAATTCGCTAATTCCCAAGCTCTCGGTGGCCACCAGAACGCCCACAAGAGAGAACGCCAGAAAGCAGCTCTCTCACCCTTCACTTACTTTCTCCACCATCAACGTTTCACACCACCCACTCATTCTCCGATCGTGCTTCCGCACGGAGGATCAACACCGTTGGTTGCTCCACGTGATCATCATCACCATCATAGGGTTGGGTTAGTGAGGCCAATGGGTGCAGGTGCAATTAGCATTAGCACAGTGAGGAAAGTACACAATACTATTAATGGTGGTGATGGTGATGGTGATGGTGATGGTGGTGTTGATCTTAACTTGAGTTTGGCTAACAATACACCTTCCAAGTTTAGGGACAATGAATTGGGTAGGTGTAGGAGAACTTGA 570 0.4667 MSGASENPIHESNEGTASSSSSSYSSSSSTTLKLFGFPLTPPSSTVSPHCPHKRFKCHFCYREFANSQALGGHQNAHKRERQKAALSPFTYFLHHQRFTPPTHSPIVLPHGGSTPLVAPRDHHHHHRVGLVRPMGAGAISISTVRKVHNTINGGDGDGDGDGGVDLNLSLANNTPSKFRDNELGRCRRT* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2623 189 MobiDBLite consensus disorder prediction 1 24 - -
Pvu9g2623 189 ProSitePatterns Zinc finger C2H2 type domain signature. 57 77 IPR013087 -
Pvu9g2623 189 ProSiteProfiles Zinc finger C2H2 type domain profile. 55 82 IPR013087 -
Pvu9g2623 189 SUPERFAMILY beta-beta-alpha zinc fingers 52 82 IPR036236 -
Pvu9g2623 189 PANTHER ZINC FINGER PROTEIN 5 18 172 IPR044299 GO:0010090
Pvu9g2623 189 PANTHER ZINC FINGER PROTEIN 8-LIKE 18 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2623 Pvu-Chr9 36657819 36658388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2623 52 122 C2H2 Transcription Factor Family AT3G58070 47.297 1.19e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2623 - - vun:114162545 242.276