Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2617 ATGTCCATGCATGTCCACGTTTTCTTCTTCTTAACGGTTGCCATTTTTTCGGCAACTTCCTCCATGTCTCAGTCGCAAACCGCAGCTTCCTGCAATGGAATATTCGTGTCGTACGTCTACACTGGCGGCGAGAGGCTGCCGCCGAACGTGTCCGACACGGCGGAGCAGCCGTACCGGTTCGAGTCCACGCTGACAGTGCTGAACAACGGGTTGGAGGAGCTGAAGTCTTGGAAGGTGTTCGTGGGGTTTCAGCACAGCGAGTGGTTGGTGTCGGCGTCGAACGCGGTGCTCGCCGACGGTACGAGTCTTCCCGCTGCGGTTGGGAACGGCACCGTGTTGAGTGGGTCCACGGTGAGGGATCTGAAGACGGCGGTGGCTACCGCCGGCGATTTGACCCAGATGCAGGTTCAGGTGGAGTTGGTGGGGAGCTTGCTTGGGGTGGCGCCACCTTCTGTGCCGATGCCTCGGTCGTTAACTTTGGCTAACGATGGATTTTTGTGTGGTCAACCCTCTCGTGAAGGGAGCAATGAAACTCATGTGTGTTGCGCAAGGGATCCCAGTTTCAAAACAAACATGAGCACAGATGAAGAGTTCTTACCCCGTGAGAAGGGTGACCTTAGCATCACATACGACATCATCAGAACCTACGATTCCAATTACTGGGCAGAGGTTACAATCGCAAACCACAACTCTTTAGGCCGTCTTGACAACTGGAGACTAAGCTGGGACTGGCAAAACGACGAGTTCATCTACACAACAAAGGGTGCATTTCCATTGAATGTGGATTCCTCTGACTGTGTCTTCGGTTCTCAAGGTAATTTCTACAAGGAACTCGACTTTTCCAACGTGTTGAACTGTGAAAGAAGGCCAACCATAGTGGATCTTCCTCCCTCAAGGTTCAACGATTCAGAACTCGGTCAAATCCCATTCTGCTGCAGGAATGGCACCATCTTGCCACCAACCATGGACCCCAGCATGTCAGCTTCAAGGTTCCAAATGCAAGTGTTCAAAATGCCACCCAACCTTAACCGCTCCACAATCACAGCTCCTCGTAACTGGGAGATAAAGGGTACCTTTAACCCTCACTATGAATGTGGCCACCCCATAAGGGTTAGTCCAAGTGAATCCCCTGACCCTACTCACTCTGCATCAAACAAATCATCAATTGCAAGTTGGCAAGTGGTGTGCAACATCACAAACACAAACCGTGAAACACGCAAGTGCTGTGTTTCCTTCTCAGCTTATTACAATGAATCTGTTATCCCATGCAAGACGTGTGCTTGTGGATGTCCAAGTAATCCGGAGAGAACATGCAGCGCAACTTCACAAGCCATGTTGCTTCCACCAGAGGCACTTCTTGTCCCTTTTGAGAACAGAACTCAAAAGGCCGTTTCTTGGGCTGAGATACAGCGTTTACCTGTGCCTAATCCCATGCCTTGTGGTGATAACTGTGGTGTGAGCATAAACTGGCACGTGGCTACAGATTACCGAAAAGGGTGGAGCGCGAGGGTGACACTTTTCAACTGGGGTGAGACTAGTTTTGCTGACTGGTTTGCTGCAGTGCAGATGGAGAAAGCTGCTAAGGGGTTTGAGGAAGTGTACTCCTTCAATGGAAGCCTTTTGGAGAGTGTGGAGAACACGATCTTCATGCAAGGGAAAGAGGGGTTGAATTTTCTTGTGGCGGAAACGGATGGATCTAACCCTCGAAAAGATCCTAGGGTACCGGGGAAACAGCAATCAGTGATCTCCTTTACCAAGAAGGAGACTCCTGGAATCAATGTGGTTGGTGGGGATGGGTTTCCAAGTAAAGTGTTCTTCAATGGTGAGGAATGCTCTCTTCCTTCGGTGTTACCAAGCTGTGTTGCGAGACCGGAGGTTTCATTGGCTACTATGATGTTCTTAGTGATGTTGTTGTCGATCATCTTCATGTCGCAATAG 1938 0.5015 MSMHVHVFFFLTVAIFSATSSMSQSQTAASCNGIFVSYVYTGGERLPPNVSDTAEQPYRFESTLTVLNNGLEELKSWKVFVGFQHSEWLVSASNAVLADGTSLPAAVGNGTVLSGSTVRDLKTAVATAGDLTQMQVQVELVGSLLGVAPPSVPMPRSLTLANDGFLCGQPSREGSNETHVCCARDPSFKTNMSTDEEFLPREKGDLSITYDIIRTYDSNYWAEVTIANHNSLGRLDNWRLSWDWQNDEFIYTTKGAFPLNVDSSDCVFGSQGNFYKELDFSNVLNCERRPTIVDLPPSRFNDSELGQIPFCCRNGTILPPTMDPSMSASRFQMQVFKMPPNLNRSTITAPRNWEIKGTFNPHYECGHPIRVSPSESPDPTHSASNKSSIASWQVVCNITNTNRETRKCCVSFSAYYNESVIPCKTCACGCPSNPERTCSATSQAMLLPPEALLVPFENRTQKAVSWAEIQRLPVPNPMPCGDNCGVSINWHVATDYRKGWSARVTLFNWGETSFADWFAAVQMEKAAKGFEEVYSFNGSLLESVENTIFMQGKEGLNFLVAETDGSNPRKDPRVPGKQQSVISFTKKETPGINVVGGDGFPSKVFFNGEECSLPSVLPSCVARPEVSLATMMFLVMLLSIIFMSQ* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2617 645 Pfam COBRA-like protein 220 399 IPR006918 GO:0010215|GO:0031225
Pvu9g2617 645 PANTHER COBRA-LIKE PROTEIN 7 4 643 - -
Pvu9g2617 645 PANTHER COBRA-LIKE PROTEIN 7 4 643 - -
Pvu9g2617 645 SUPERFAMILY Carbohydrate-binding domain 202 251 IPR008965 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2617 Pvu-Chr9 36598132 36600662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2617 31 618 COBRA Gene Family AT4G16120 65.313 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2617 - - gmx:100778971 1114.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2617 9 36598132 36600662 Pvu9g2617 9 36598132 36600662 ECH
Pvu3g1145 3 27746661 27749302 Pvu9g2617 9 36598132 36600662 PCT