Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2604 ATGGGACAACAATCAGATTACAAAACCCAGTTGGTATTGGAGGTTTGCTCCATTTCCACACGTTCTGTTGTGTGTGTTCATACACTTCTCTCTAACCCTGCTAAGCCACCTTTCATAGATTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGGAGTGCTCACCATCCGCCAGAAATACCATAAACTTGCCTTGCAACTTCATCCGGACAAGAATAATCATCCAAAGGCTGAAATTGCATTCAATCTTATATCTGAGGCATATATGTGTCTGTCTGATGCTGCAAAAAGGAAAGCTTTTGACTCAAAAAGACATAACAATTTCTGCTATGAGTGCAATAGAATTCCATATACATCCAAAAAAGTACCTGTCCCTGGCAATTCCAATGGCTCAAGTTTCAAGCCACGGAATATCACTAGTGGATCAAGATCTTACAAAGTTTGGAGAAATATTGGGGAGATGAGAGAAAGGCTGAAGGAGGAGGCTAAGGTGATACAAAACTGTCTGCGAGCAAATTTAAGGTCAAAGAAAGAATCTCCCCTTTACAATCCTGCAGATTATAGACATGGAAGCAGGTTCCAGCATAAAGTTGAGAGAGAACTCCCTGTTTTCAATCCAATGGAATACTTGTACCAAGGGTATCCTCATACGAGAGGCCATGTTCCCAAGAATTGTGAGGCATGTTGGTATTTGCATACACAAAATCTTGTGCACAATGACAAGGGAGAAGCTAAGTATGTCTCCCCAGTATTTGAGGTCAGATCACAAAGTAAATTTGCTAATGAACCATCATGA 795 0.4075 MGQQSDYKTQLVLEVCSISTRSVVCVHTLLSNPAKPPFIDWYCILGVEENAGVLTIRQKYHKLALQLHPDKNNHPKAEIAFNLISEAYMCLSDAAKRKAFDSKRHNNFCYECNRIPYTSKKVPVPGNSNGSSFKPRNITSGSRSYKVWRNIGEMRERLKEEAKVIQNCLRANLRSKKESPLYNPADYRHGSRFQHKVERELPVFNPMEYLYQGYPHTRGHVPKNCEACWYLHTQNLVHNDKGEAKYVSPVFEVRSQSKFANEPS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2604 264 SUPERFAMILY Chaperone J-domain 28 107 IPR036869 -
Pvu9g2604 264 Gene3D DnaJ domain 39 159 IPR036869 -
Pvu9g2604 264 CDD DnaJ 40 93 IPR001623 -
Pvu9g2604 264 Pfam DnaJ domain 40 101 IPR001623 -
Pvu9g2604 264 SMART dnaj_3 39 96 IPR001623 -
Pvu9g2604 264 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 260 - -
Pvu9g2604 264 PRINTS DnaJ domain signature 42 60 IPR001623 -
Pvu9g2604 264 PRINTS DnaJ domain signature 60 75 IPR001623 -
Pvu9g2604 264 PRINTS DnaJ domain signature 76 96 IPR001623 -
Pvu9g2604 264 ProSiteProfiles dnaJ domain profile. 40 104 IPR001623 -
Pvu9g2604 264 PANTHER BNAC03G44070D PROTEIN 4 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2604 Pvu-Chr9 36503205 36504591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2604 40 102 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.299 1.99e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2604 - - gmx:100778573 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2604 9 36503205 36504591 Pvu9g2604 9 36503205 36504591 ECH
Pvu3g1126 3 26920488 26921973 Pvu9g2604 9 36503205 36504591 PCT