Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2590 ATGGGTGAAAATGTCAAAGCCAAAGACCAACAAAGAAGGTTCGCCATTCTTGGCGTCTCTTCAATCCTCCTTGTGGCTGTGGTGGCTGCAGTGGCTGTTACCTTGAACCAGGGAGAAGAACCTGCAGATGATGCAGCTCATATCACTAGCTCTCAAAGGACCAGTGTAGAGATACTGTGCCATTCAACAGAATACGCCAAAACATGCAAGAAAAGCCTTGCAAAAGTACCTGACAGAAATGCAGACACAAGAGCTTTGGTGAAAGCTGCGATCAATGCCACAGCAGTGGAACTTTTGAGTCACATAAAGAACTCCACCCTTTATCGTGACTTGGGGAAGGACAACATGACAAGACAAGCCGTGGAAATTTGCAAGGAAGTGTTTGAGTATGCGATTCATGGTATTCAGAAATCTGTTGATACAATAGACAAGTTTGAATATGGGAAGTTGAGTGAATACATTTATGATCTTAAGGTTTGGATCTCGGGGAGTCTCACACACCAATACACATGCTTGTATGGTTTTGAGCACACAGACACAAAAGCTGGTGCCAAAATGAACAAGGTTTTGAACACCTCTTTGGAGCTTACCAGCAATGCATTGGATATGATCGATGTGATCTCTGGTATACTGAAGGACCTTAACATGACCTCATTTGGGAATAGGAGGCTTCTCTCTCAGGACAAAGTGCCCTTAGATGATTACCCTTCATGGGTGAGTGAAGGGAAAAGACGTCTTCTTTCGCAGGGCACAGAAAGTGCTAAGGTAGTTGTGGCCCAAGATGGGTCTGGCCAATTCAAAACCATCAAGGAAGCTCTTAAGACCGTTCCCCCAAACAATGCTGAACCTTATGTGATTTACGTCAAAGCTGGTGTTTACAAGGAAAATGTGGACATGTCCATGCTCATGACCCATGTCACCATCATTGGAGATGGTCCCACAAAGACTAGATTCAGTGGCAGTTTAAACTACGATGATGGCGTCCAAACTTACAAAACTGCTACTTTTGCGGTTAATGCTGCAAACTTCATGGCCAAGAATGTTGGATTTGAAAACACAGCAGGGTCTAAGAAACATCAAGCAGTGGCACTTCGAGTAACAGCAGACCAAGCTGTGTTTGTGAACTGCCACATGGACGGGTTCCAAGACACCCTCTATGCTCAGTCCCAACGCCAATTCTACCGTGACTGTATAGTGACTGGCACAGTGGATTTTGTGTTTGGAGATGCAGTTGGAATGTTCCAAAAGTGCAAGCTAATTGTGAGAAAACCACTGAACAAACAAAAGTGCATGGTGACTGCTGGTGGGAGGGTGAAATCTGACAGCCCCAGTGCCCTTGTTTTCCAGGGTTGCCACTTCACAGGGGACCCTGAATTGCGTAGCTTGGCAGACAAGGTAGCATACCTTGGAAGGCCTTGGAGGGCATTCTCTAAGGTCATCATCATGGAGTCTCAAATTGACAACATCTTCTTACCAGAAGGTTACATGGGATGGATGGGAATTAGTTTCATGGACACTTGTACTTATTATGAGTACAATAACAAGGGCCCTGATGCAGACACATCATCGAGAGTCAAATGGCCTGGTTTCAAGGTTCTAACTGCTCAAGAAGCTTCTGACTATTATCCTTCAAAGTTCTTTGAACTTGCTAATTCAGATGAACGTGATGATTGGATTGTTAGATCTAAGGTACCTTACAGTCTTGGAGCTATGAATTCCTAG 1722 0.4454 MGENVKAKDQQRRFAILGVSSILLVAVVAAVAVTLNQGEEPADDAAHITSSQRTSVEILCHSTEYAKTCKKSLAKVPDRNADTRALVKAAINATAVELLSHIKNSTLYRDLGKDNMTRQAVEICKEVFEYAIHGIQKSVDTIDKFEYGKLSEYIYDLKVWISGSLTHQYTCLYGFEHTDTKAGAKMNKVLNTSLELTSNALDMIDVISGILKDLNMTSFGNRRLLSQDKVPLDDYPSWVSEGKRRLLSQGTESAKVVVAQDGSGQFKTIKEALKTVPPNNAEPYVIYVKAGVYKENVDMSMLMTHVTIIGDGPTKTRFSGSLNYDDGVQTYKTATFAVNAANFMAKNVGFENTAGSKKHQAVALRVTADQAVFVNCHMDGFQDTLYAQSQRQFYRDCIVTGTVDFVFGDAVGMFQKCKLIVRKPLNKQKCMVTAGGRVKSDSPSALVFQGCHFTGDPELRSLADKVAYLGRPWRAFSKVIIMESQIDNIFLPEGYMGWMGISFMDTCTYYEYNNKGPDADTSSRVKWPGFKVLTAQEASDYYPSKFFELANSDERDDWIVRSKVPYSLGAMNS* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2590 573 CDD PMEI-like_3 59 209 - -
Pvu9g2590 573 TIGRFAM PME_inhib: pectinesterase inhibitor domain 49 206 IPR006501 GO:0004857
Pvu9g2590 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 209 IPR035513 -
Pvu9g2590 573 SMART PMEI_2 51 203 IPR006501 GO:0004857
Pvu9g2590 573 PANTHER PECTINESTERASE 8 571 - -
Pvu9g2590 573 ProSitePatterns Pectinesterase signature 1. 280 299 IPR018040 -
Pvu9g2590 573 Pfam Plant invertase/pectin methylesterase inhibitor 56 203 IPR006501 GO:0004857
Pvu9g2590 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 208 IPR035513 -
Pvu9g2590 573 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Pvu9g2590 573 PANTHER PECTINESTERASE 8 571 - -
Pvu9g2590 573 Gene3D - 253 572 IPR012334 -
Pvu9g2590 573 SUPERFAMILY Pectin lyase-like 253 547 IPR011050 -
Pvu9g2590 573 Pfam Pectinesterase 256 547 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2590 Pvu-Chr9 36362000 36364996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2590 5 566 Carbohydrate Esterase AT5G49180 43.924 3.31e-169 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2590 K01051 - gmx:100784682 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1114 3 26758983 26761215 Pvu9g2590 9 36362000 36364996 PCT