Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2568 ATGTCACCACACCTTCAAACTTTGTTACCACTTCATCTGAACATGTCTTCTTCCTTTCCACCTTCTTGGCTCACTTCCCCTTCCTGCTCCACCTTGGACATAGATTCATCTTCCCCTACTGCGTTTCTCACAGTTCAGTGGTTAAGGTTCCTTCTTCTATCACCATGTCCTCAACGACTCATTCTCTCTGCTATTGACTTCATCTTCTTGCTCACTCTCTCAGCCTTTGCAGCTGTTAAACTATATTCTAGATTCTCTTCCCCACATAGCTCTTCCTCTTCCACCACCAAACCCCTTTTGCATGAGAAACACTTTGAGCATAAAGTCACCTTCTTGTTCAAACTAACCTTCTTGGTAACCACCCTTTTGCTCGCAGCTTACACTGTTCTTGGCGTCTTGGCCTTCACTCAAACGAGTCTTTCTTCATGGACAGTCATAGAGGCGCTCTTTCGGCTCTTCCAAGCTGTGGCCAACATGGTGGTTGTGATCCTATTGGTTCACGAGAACAAGTTCAAAGCTTCAGAGCACCCTTTCTCGCTGAGAATGTATTGGATTGGAAACATGGTGGTTTCGTGCTTTTTTGCCATTTCAGGTATTGTTCGTTTTGTAACTGTGGATGGAGCGAGGTTGGAGCCTAGTTTGAGAGTGGATGATGTGTTTTCTTTGGTTAATCTTCCACTTTCTGCGTTCCTTTTCGTGGTAGCAACGAAGGGGGTAACGGGGATTCAGGTGATTGGAGTTTCTGATGATGTTGCAACATATCAGAGCCTTTCCAATGACAGAAACTCGAGTCCTTATGCTCATTCCTCTGTTTTTTCCAAAATACTCTGGCTTTGGATGAACCCTGTGCTGAACAAAGGCTACCGAGCACCCCTGAAGCTCAATGATGTGCCTTCTCTTCCTCTGGAGTTTCGTGCAGAAAAAATGTCAGAGCTTTTCCAGAGCAATTGGCCGAAGGAAGAGGATAACTGCAAGCACCCGGTTGGTGTCACCTTGTTCAGATGCTTCTGGAGGCACATAGCTTTCACTGGCTTCCTTGCAGTCATAAGACTTGCGGTTATGTACGTTGGTCCAATGCTTATTCAGAGCTTTGTTGACTTCACCTCAAGGAAAGACAGCACCCCTCTTGAAGGACTCATTCTGATTCTGATCCTGTTCTTTTCAAAATCAGTTGAGGTCCTCTCTGTGCACCAGTTCAACTTCAACTCTCAGAAACTAGGCATGTTGATGCGTTCCAGCATCATCACTTCAGTGTACAAGAAGGGTTTGAGGCTTTCAAGTTCCTCAAGGCAGGCTCATGGCACTGGGCAGATTGTGAATCACATGGCTGTTGATGCACAACAGCTCTCAGATTTGATGATGCAGTTTCACCCCATATGGTTGATGCCACTGCAAGTAGCTGCAGCTTTGGCTCTTATCTACAACAGTATTGGCTTGTCAGCACTTGCAGCACTGCTTGGAACCAGCTTGGTGTTTATTTTCACTCTCATTCGCACCAAGAAGAGCAACAGCTTTCAGTTCAGGATCATGAAGAGCCGTGACTTGAGGATGAAGGCCACCAATGAGTTGCTTAACAACATGCGTGTGATCAAGTTCCAAGCCTGGGAGGAGTACTTTGGCAACAAGATTCAGCAGTTTAGAGAAGCTGAACATGGTTGGATTGGAAAGTTCTTGTACTACTTTGCCATCAACATGGGGGTTCTGACCACTGCTCCTTTGTTGGTGTGTGTTCTCACATTTGGAGCTGCCATTCTTCAGGGTGCTCCTTTGAATGCTGGTACTGTGTTCACAATCACTTCAGTGATCAAGATTTTGCAAGAGCCTGTGAGGACCTTCCCTCAGGCTCTCATCTTGATTTCCCAAGCGATGATATCTCTTGGGAGGTTGGATGAGTTCATGATGAGCAAGGAAATGGATGAGGGTGCAGTGGAGAGATTGGAGGGATGTGATGGTGACATTGCTGTGGAGATCAAGAATGGGGAATTCTCCTGGGATGATGCAGATGCCAATGTGGCTCTGAAAGTTGAAGACTTGGAAATTAAGAGAGGGGACCATGCTGCTGTTGTGGGAACAGTTGGGTCAGGCAAGTCTTCTTTGCTGGCTTCTTTGTTAGGGGAAATGATCAAGATATCAGGAAAGGTCAGAGTTTGTGGGTCAGTAGCCTATGTAGCACAGACATCATGGATTCAGAATGCAACAATCCAAGAGAACATAATGTTTGGTTTACCAATGAACAGAGAGAAGTACGAGGAAGCTATAAGAGTGTGTTGCCTAGAAAAGGATCTTGAAATGATGGAATATGGAGACCAAACTGAGATTGGAGAAAGGGGTATTAACCTCAGTGGTGGTCAGAAGCAACGTGTACAACTTGCTAGAGCTGTATACCAAGACTGTGACATCTATCTCCTTGATGATGTATTCAGTGCTGTTGATGCACAAACTGGCTCCTTTATTTTCAAGGAATGTATCATGGGGGCTCTTAAAAACAAGACCATTCTACTTGTAACCCACCAAGTTGACTTCTTGCATAATGTTGACTGTATAATGGTGATGAGAGAAGGGAGAATCGTGCAAAGTGGGAAGTATGATGAACTTCTGAATGCAGGTCTGGATTTTGGTGCACTTGTGGCTGCTCATGAATCCTCTATGGAGATTGCTGAGTCTAGCGATAAAGGTGGTGATGATTCGATTCAGTCTCCAAAACTGGCTCGAATCCCCTCAAAAGAAAAGGAAAAGGAAGGTGAAAAGCAACCTCAAGATCAAGCTAAGTCAGCTAACACCACAGCAAAACTCATTGAAGATGAGGAAAGAGAAACTGGGCGTGTGAACCTGAAAGTGTATGAACACTACTTCACTGAAGCATTTGGGTGGTGGGGTATTGTTCTGATGCTGGCAATGTCTCTAACATGGATTTTGTCTTTCTTGGCTGGTGACTACTGGCTAGCAATTGGAACTGCAGAAGGCAGTAACTTTGCTCCTTCTACATTCATCACTGTCTATGCTTGCATAGCAGTTGGTGTAACTTTTGTTGTGATGGCAAGATCACTCTTATTTACCTATTGGGGTCTCAAGACATCTCAGAGCTTCTTCAGTGGAATGCTTCAAAGCATCTTGCATGCACCAATGTCATTCTTTGACACCACTCCCTCTGGCAGAATTTTGAGTCGTGTATCTACTGATATACTTTGGATTGACATATCAATTCCAATGTTAGTAAACTTCGTAATGGTGGCATACTTCTCAGTGATCAGCATTCTCTTTGTAACATGCCAAAATGCTTGGGAAACGGTCTTCCTCTTGATCCCACTGTTCTATCTTAATAACTGGTATAGGAAATATTACCTTGCATCTTCTCGGGAATTGACTCGCCTTGATTCCATCACCAAAGCTCCTGTTATTCACCACTTTTCAGAAACCATTGCTGGTGTTATGACCATTCGTGGCTTCAGAAAACAGAACACATTTTGTCAAGAAAATATTGACAAAGTGAATGCTAGTCTGAGAATGGATTTCCACAACAATGGTGCTAATGAATGGCTTGGTTTTCGCTTGGACTACATGGGAGTGGTTTTCCTTTGCATTGCCACTGTTTTTATGATCTTTCTCCCAAGTGCTATCATTAGGCCAGAATATGTTGGTCTGTCTTTGTCCTATGGTTTGGCTCTGAGTAGTCTTTTGGCATTTACTATAACAATGACTTGCTCTGTTGAGAACAAAATGGTTTCAGTTGAGAGAATAAAGCAGTTCACCAACCTTCCCTCAGAAGCGCCATGGAAAATGGCTGATAGCTCTCCTCCTAAGAATTGGCCCAGCCATGGCCACATTGAGTTAAACAATTTGCAGGTTCGGTATCGGCCAAATACTCCTCTGGTTCTGAAAGGAGTCTCTCTCACCATTGAAGGAGGAGAAAAGATTGGTGTTGTTGGTCGAACAGGGAGTGGGAAATCAACCCTCATTCAGGTGTTATTTAGGTTGATTGAGCCTTCAGCAGGGAAAATAACTGTTGATGGGATCAACATTTGCACTGTGGGCCTTCATGATCTGAGGTCTCGATTTGGAATTATCCCTCAAGATCCTGTTCTCTTTCAAGGAACAGTACGAAGCAACATTGATCCCCTTGGACTGTACTCAGAAGAAGAAATCTGGAAGAGCCTAGAACGTTGCCAACTGAAAGAAGTGGTGGCTGCAAAGTCTGAGAAACTTGAGGCTTCAGTGGTTGATGGTGGAGACAATTGGAGTGTGGGGCAAAGACAGCTTCTGTGCTTGGGAAGGATCATGCTAAAACGCAGCAAAATACTGTTCATGGATGAAGCAACAGCATCTGTTGATTCACAAACTGATGCTGTGATACAGAAAATCATCCGTGAGGATTTTGCAGATCGTACAATTATCAGCATTGCTCACAGAATACCTACAGTCATGGACTGTGACAAAGTTTTAGTCATTGATGCAGGGCTTTCAAAAGAATATGACAAGCCATCACGTTTGCTAGAAAGGCCTTCACTTTTTGGAGCATTGGTAAAGGAGTACTCCAATAGATCTGCACAAATATAG 4554 0.4407 MSPHLQTLLPLHLNMSSSFPPSWLTSPSCSTLDIDSSSPTAFLTVQWLRFLLLSPCPQRLILSAIDFIFLLTLSAFAAVKLYSRFSSPHSSSSSTTKPLLHEKHFEHKVTFLFKLTFLVTTLLLAAYTVLGVLAFTQTSLSSWTVIEALFRLFQAVANMVVVILLVHENKFKASEHPFSLRMYWIGNMVVSCFFAISGIVRFVTVDGARLEPSLRVDDVFSLVNLPLSAFLFVVATKGVTGIQVIGVSDDVATYQSLSNDRNSSPYAHSSVFSKILWLWMNPVLNKGYRAPLKLNDVPSLPLEFRAEKMSELFQSNWPKEEDNCKHPVGVTLFRCFWRHIAFTGFLAVIRLAVMYVGPMLIQSFVDFTSRKDSTPLEGLILILILFFSKSVEVLSVHQFNFNSQKLGMLMRSSIITSVYKKGLRLSSSSRQAHGTGQIVNHMAVDAQQLSDLMMQFHPIWLMPLQVAAALALIYNSIGLSALAALLGTSLVFIFTLIRTKKSNSFQFRIMKSRDLRMKATNELLNNMRVIKFQAWEEYFGNKIQQFREAEHGWIGKFLYYFAINMGVLTTAPLLVCVLTFGAAILQGAPLNAGTVFTITSVIKILQEPVRTFPQALILISQAMISLGRLDEFMMSKEMDEGAVERLEGCDGDIAVEIKNGEFSWDDADANVALKVEDLEIKRGDHAAVVGTVGSGKSSLLASLLGEMIKISGKVRVCGSVAYVAQTSWIQNATIQENIMFGLPMNREKYEEAIRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRVQLARAVYQDCDIYLLDDVFSAVDAQTGSFIFKECIMGALKNKTILLVTHQVDFLHNVDCIMVMREGRIVQSGKYDELLNAGLDFGALVAAHESSMEIAESSDKGGDDSIQSPKLARIPSKEKEKEGEKQPQDQAKSANTTAKLIEDEERETGRVNLKVYEHYFTEAFGWWGIVLMLAMSLTWILSFLAGDYWLAIGTAEGSNFAPSTFITVYACIAVGVTFVVMARSLLFTYWGLKTSQSFFSGMLQSILHAPMSFFDTTPSGRILSRVSTDILWIDISIPMLVNFVMVAYFSVISILFVTCQNAWETVFLLIPLFYLNNWYRKYYLASSRELTRLDSITKAPVIHHFSETIAGVMTIRGFRKQNTFCQENIDKVNASLRMDFHNNGANEWLGFRLDYMGVVFLCIATVFMIFLPSAIIRPEYVGLSLSYGLALSSLLAFTITMTCSVENKMVSVERIKQFTNLPSEAPWKMADSSPPKNWPSHGHIELNNLQVRYRPNTPLVLKGVSLTIEGGEKIGVVGRTGSGKSTLIQVLFRLIEPSAGKITVDGINICTVGLHDLRSRFGIIPQDPVLFQGTVRSNIDPLGLYSEEEIWKSLERCQLKEVVAAKSEKLEASVVDGGDNWSVGQRQLLCLGRIMLKRSKILFMDEATASVDSQTDAVIQKIIREDFADRTIISIAHRIPTVMDCDKVLVIDAGLSKEYDKPSRLLERPSLFGALVKEYSNRSAQI* 1518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2568 1517 Pfam ABC transporter 677 806 IPR003439 GO:0005524
Pvu9g2568 1517 Pfam ABC transporter 1292 1440 IPR003439 GO:0005524
Pvu9g2568 1517 MobiDBLite consensus disorder prediction 887 932 - -
Pvu9g2568 1517 Gene3D - 1258 1507 IPR027417 -
Pvu9g2568 1517 CDD ABCC_MRP_domain2 1273 1493 - -
Pvu9g2568 1517 CDD ABCC_MRP_domain1 655 855 - -
Pvu9g2568 1517 Gene3D - 634 897 IPR027417 -
Pvu9g2568 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 653 874 IPR027417 -
Pvu9g2568 1517 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 77 1515 - -
Pvu9g2568 1517 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1275 1509 IPR003439 GO:0005524
Pvu9g2568 1517 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 957 1238 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu9g2568 1517 SUPERFAMILY ABC transporter transmembrane region 332 629 IPR036640 GO:0005524|GO:0016021
Pvu9g2568 1517 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 77 1515 - -
Pvu9g2568 1517 SUPERFAMILY ABC transporter transmembrane region 957 1255 IPR036640 GO:0005524|GO:0016021
Pvu9g2568 1517 Pfam ABC transporter transmembrane region 342 609 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu9g2568 1517 Pfam ABC transporter transmembrane region 979 1202 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu9g2568 1517 Gene3D ABC transporter type 1, transmembrane domain 923 1256 IPR036640 GO:0005524|GO:0016021
Pvu9g2568 1517 Gene3D ABC transporter type 1, transmembrane domain 330 633 IPR036640 GO:0005524|GO:0016021
Pvu9g2568 1517 SMART AAA_5 1301 1486 IPR003593 -
Pvu9g2568 1517 SMART AAA_5 682 855 IPR003593 -
Pvu9g2568 1517 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 655 878 IPR003439 GO:0005524
Pvu9g2568 1517 MobiDBLite consensus disorder prediction 904 919 - -
Pvu9g2568 1517 ProSitePatterns ABC transporters family signature. 780 794 IPR017871 GO:0005524
Pvu9g2568 1517 CDD ABC_6TM_ABCC_D2 956 1250 IPR044726 GO:0140359
Pvu9g2568 1517 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 341 621 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu9g2568 1517 CDD ABC_6TM_ABCC_D1 342 629 IPR044746 GO:0140359
Pvu9g2568 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1265 1508 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2568 Pvu-Chr9 36134898 36144054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2568 655 904 Calmodulin-binding Proteins AT2G36910 30.037 5.41e-26 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2568 - K05665 vra:106762025 2642.07