Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2561 ATGAAAGAGTATTCCACACACCACACCTCTCCTCTTCCTTTCTCCTCTCTACCATCCGAATTTCCAACAACCTCCATTTCTTCTTTTCCTTTCAACACTCATTCTTCCTTCACCACTTTCTCTCTTCTCTCATCTCTTTCTTCGTCAACACTCTTCCTTTCCATACCTGCATTCGAGATAAGCATGCGTAACCCTGAAGGTGAACTTAAAATAAGTTTTGGCTATCAATGCAATAGTGATAAAGGTATACCTTGCAATGAAATCAATAGAACAAGCAGTTTCTCTTGCTTTTCTGGTGCTGCCTTAAGTGCAAATGCTACACTTGCCAACACCAATATCTGCAATGGCGTTATAGGTGAAGAAATCCTTCCGAGTTTGGACTCTCCTAAATCGTTTCGGATGGTACCCTCTTCATCAAGTTTTCCAAAGTTGGACATGTTATCATCTTCTGTCCATAGTAGTTTTTCAAATCTAAGTTGCAGCCCTTCCACTCCAAGTAACATGCTTGACTATGACCCTTGTACATTAAAATCTATGAGTGCTCCTTCCAGAACTGAAGGTTTTCTTAGTGCCATGGATGTTCAAGTTGCTGGAGGAGCGGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAGGAAAATGGGTGGCTCTTCTGTGCAATTTATGATGGATTCAATGGGAGAGATGCAGCTGACTTTTTGGCGGGTACCCTTTACGACACCATTGTATCTTATTTCAATATGTTACATTGTGATTTGGAACCAGATTCCATAAAAAAAGCTTCTGACAATATGGGTGTGGATGAATCCTTTCCATATACTTTGGATGATAGTCTTATTCTTCAGAAGCATCAATCTCCTTCAAAATTTAAAGGAAACAATTCTGGTCTTGACTGTTTTGCAAACATTACTTCACCTTCCAAGTCAGAAGCATCTTCTAAATCATTTTCACATGGCACAGTACTTGATGGTCTCCAGCATGTTCTTAGTCAGGTTGAGAATGATTTCTTATGCATGGTTGAGCAGGAAATGGAGGAACGTCCAGATTTAGTTTCTATTGGGTCTTGTGTTTTACTTGTGCTTCTTCATGGCAATGATTTATATACACTTAATCTTGGCGACAGCAGAGCAGTATTGGCGACGTGCTGCACAGGTAACTTAATAGATGGGAATGAGAGATTGAAGTCTATCCAGCTCACAGATAGTCATACTGTTGACAATGAAGCTGAAAGAGATCGAGTTCTTGCTGATCACCCTGATGATCCTAAAACCATAGTAGCAGGGAAAGTGAAAGGAAAACTTAAGGTTACTCGAGCTTTAGGAGTAGGGTACTTGAAAAAGAAAATTCTGAATGATGCATTAATGGGAATCCTTCGAGTTCCTGATCTCACAAGCCCGCCGTATATTTCAACTGATCCATCGTTGAATGTGCACAAAATCTCAGATTCTGACCAATTTGTGATAGTTGGGAGTGATGGTTTATTTGACTTCTTCAGTAATGATGAAGCAGTACAGCTTGTAGAGTCTTATATCTTGAGAAATCCTTTTGGTGATCCAGCAAAATTTCTTATTGAGCAATTAGTTGCGAGAGCAGCTGATTCTGCAGGCTTCAGCATGGAAGAGTTGATGAATGTTCCTGATGGGAAGGAGGAGGAAGTACCATGA 1665 0.403 MKEYSTHHTSPLPFSSLPSEFPTTSISSFPFNTHSSFTTFSLLSSLSSSTLFLSIPAFEISMRNPEGELKISFGYQCNSDKGIPCNEINRTSSFSCFSGAALSANATLANTNICNGVIGEEILPSLDSPKSFRMVPSSSSFPKLDMLSSSVHSSFSNLSCSPSTPSNMLDYDPCTLKSMSAPSRTEGFLSAMDVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIVSYFNMLHCDLEPDSIKKASDNMGVDESFPYTLDDSLILQKHQSPSKFKGNNSGLDCFANITSPSKSEASSKSFSHGTVLDGLQHVLSQVENDFLCMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTLNLGDSRAVLATCCTGNLIDGNERLKSIQLTDSHTVDNEAERDRVLADHPDDPKTIVAGKVKGKLKVTRALGVGYLKKKILNDALMGILRVPDLTSPPYISTDPSLNVHKISDSDQFVIVGSDGLFDFFSNDEAVQLVESYILRNPFGDPAKFLIEQLVARAADSAGFSMEELMNVPDGKEEEVP* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2561 554 Gene3D - 168 553 IPR036457 -
Pvu9g2561 554 SUPERFAMILY PP2C-like 200 530 IPR036457 -
Pvu9g2561 554 Pfam Protein phosphatase 2C 311 519 IPR001932 -
Pvu9g2561 554 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 61 547 - -
Pvu9g2561 554 CDD PP2Cc 201 532 IPR001932 -
Pvu9g2561 554 ProSiteProfiles PPM-type phosphatase domain profile. 188 554 IPR001932 -
Pvu9g2561 554 PANTHER PROTEIN PHOSPHATASE 2C 61 547 IPR015655 GO:0004722|GO:0006470
Pvu9g2561 554 SMART PP2C_4 179 531 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2561 Pvu-Chr9 36094756 36097815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2561 64 552 PP2C-type Phosphatase Gene Family AT3G16560 59.127 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2561 - - gmx:100791404 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2561 9 36094756 36097815 Pvu9g2561 9 36094756 36097815 ECH
Pvu3g1091 3 26053314 26057290 Pvu9g2561 9 36094756 36097815 PCT