Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2551 ATGTTTCATTCGCAACGCTTCAAACCCCTTCTTCTCTATCTCAACTCACTCACAATAACACCTCTTCAAACCCCAAAACCCAATAACCTTTTTCCCTCGATACTCTTTCTGAAACACACCTCAAATGCTTCACAGCAACCCTCTTTCACGGTTTCCTACCTCGTAAACGGCTGCGGGTTCTCCCCAGAAACCGCTCTCAAGGCCTCCAAATTCATTCAATTCGAAACCCCCGAAAAGCCCGACTCAGTCATCGCCTTTTTCAGAGACAACGGATTCAGCAGCACCCAGATAAACAGCATCGTTAGAAGAGCACCCAATGTGCTCACTTGCGACCCCCACAAAAGGGTTCTTCCAAAGTTCGAGTTTTTACTCTCCAAAGGGGCCTCGCGCTCTGACATTGTGGAACTGGTAAGTAGGAGCCCCAGAATCCTTTATTCGAGCCTCGAGAATAACATTGTCCCTTCCTATGAACTGATGAGGAAGTTTCTTCAAACTGACGAGAAAACCATGGACTGCATACGCTCTTGTGGGCATTTCTTTGGTACTGATCGTGTGGTGCACAATGTGAAACTTTTAGTTGATTATGGAGTCACTGATCCTGTATTAGCCTTTTTGTTACGCAGGAGAGTTTCTATAATCTTGTGTTCTGCCTTGAAGAGGACTTTGGATGAGGTTAAGGAAATGGGGTTTGACCCTTCCAAGTTGAGCTTTGCCATCGCGCTGCTGGCCAAAAAGACTATTCCGAAATTGCGATGGGAGAGGAAAGTTGAAGCCTTTAAGAGATGGGGTTGGTCTGAAGAACTGGTTCTTAGTGTGTTCAAGAGGCAGCCCCTCGTAATGTTGGTGTCCCAAGAGAAGATTGATAGGATTATGAGATTTTGGGTCAAGCAATCAGGTTGGGACTATTTGGCTCTTACCAAGAAGCCAGAGATTTTTGGATTTAGTTTGGAGAGAAGGATCATTCCAAGGGCACTTGTTGTGCAGTATTTACTCAGGAAAGGTTTGAGGAGAAAGAGTGCCAGCTTGATTACGCCATTTTCTGTTTCTGAAAAGGAGTTTATTGAAAAGTATGTCATGCGTTTTAAGGAGGAGACAAGTGAACTATTAAAGCTGTACCAAATGAGTGTTCAAGGACTAAAAGAGGATGATAAAATGGTTAACTCATGA 1167 0.4422 MFHSQRFKPLLLYLNSLTITPLQTPKPNNLFPSILFLKHTSNASQQPSFTVSYLVNGCGFSPETALKASKFIQFETPEKPDSVIAFFRDNGFSSTQINSIVRRAPNVLTCDPHKRVLPKFEFLLSKGASRSDIVELVSRSPRILYSSLENNIVPSYELMRKFLQTDEKTMDCIRSCGHFFGTDRVVHNVKLLVDYGVTDPVLAFLLRRRVSIILCSALKRTLDEVKEMGFDPSKLSFAIALLAKKTIPKLRWERKVEAFKRWGWSEELVLSVFKRQPLVMLVSQEKIDRIMRFWVKQSGWDYLALTKKPEIFGFSLERRIIPRALVVQYLLRKGLRRKSASLITPFSVSEKEFIEKYVMRFKEETSELLKLYQMSVQGLKEDDKMVNS* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2551 388 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Pvu9g2551 388 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Pvu9g2551 388 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Pvu9g2551 388 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Pvu9g2551 388 SMART mt_12 203 231 IPR003690 GO:0003690|GO:0006355
Pvu9g2551 388 PANTHER CGI-12 PROTEIN-RELATED 3 376 IPR003690 GO:0003690|GO:0006355
Pvu9g2551 388 Pfam mTERF 85 289 IPR003690 GO:0003690|GO:0006355
Pvu9g2551 388 Pfam mTERF 253 353 IPR003690 GO:0003690|GO:0006355
Pvu9g2551 388 Gene3D Transcription termination factor 3, mitochondrial 169 371 IPR038538 -
Pvu9g2551 388 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 3 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2551 Pvu-Chr9 36026747 36027913 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pvu9g2551 mTERF 7.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2551 K15032 - gmx:102666739 556.599