Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2550 ATGTTTGCCTCCAAAAGCTTCAAATCCCTTCTTCTTCTCCATTCCAAGAGACTCACAACCCCCAAACCCTATTTTCCTTTTCCCTCCACACTCTCTCTCAAACACTTCTCCCTCACTTCACAACAACACTCACTCACCGTTTCCTACCTCATAAACACCTTTGGCTTCTCACCACAAACCGCTCTCAAGGTTTCCGAGAGTGTTAGCTTCGATACCCCTCAAAAGCCAGACTCAGTCATCGCTTTCTTTACCAAAAATGGATTCACCGATGCCCATATCAACACCATTGTCAAAAGGGTACCCAGCATACTCGTTTGCAACCCCGACAAGAGGCTCTCGCCAAAGTTCCAATTTTTACTCTCGAAGGGTGCTTCAGCTTCTGATATAGTTCGTCTTGTTCATAGGTGCCCCAGAATCCTCGGATCCAGCCTCAAGAACAACGTGATCCCCTCCTTCGAATTGGTGAGAAGGTTCCTCCAATCCGACCAGAAAACCATTGATTGTGTTTTCGGTAACAGACCTTTCCTTCAGTACAACGTTGGAGTGCAGAATGTGAACATGTTGCTTGATGCTGGAGTTCTTGATTCCAGCATCGGCTATTTGTTTGGAAGGAGGCCTTCTATACTCTTGTCTACTAACTTGAGGGAGGCAATTGATGAGGTTAAGGAAATGGGGTTCGACCCTTCTAAGATAACTTTCGCGATTGCTTTGCATGCCAAAAGGGTTGTGTCGAAATCGCGGTGGGACGCGAAAGTTGATGCCTTTAAGATGTGGGGTTGGTCGGAGGAAATGGTTCTTGATTCGTTCAGGAAGCATCCTCTCTTAATGTTGGCTTCCAAGGATAAAATTAATGAGGTTATCAGATTTTGGGTTGTTGAATTGGGTTGGGACCCTTTGGCACTTGCCAAAATGCCGAAGATTTTTGGGTTCAGTTTGGAGAGAAGGATTGTTCCGAGGGGTTTGGTTCTGAAGCATTTGATCGTCAAGGGTTTGAGAGAGAAGAGTGCCAAGTTGTCTACCCCGTTTGATGTTTCTGAAGAGTTGTTTCTTAAAAATTATGTGATGCGGTTTAAGGAGGAAGTGTGTGAACTGTTAAAGCTTTATCAGGAAAAGATAAGTTTCCAAGAACACAGGGAGGGTTGTGTAGAATCTGCCAGTTAG 1161 0.4496 MFASKSFKSLLLLHSKRLTTPKPYFPFPSTLSLKHFSLTSQQHSLTVSYLINTFGFSPQTALKVSESVSFDTPQKPDSVIAFFTKNGFTDAHINTIVKRVPSILVCNPDKRLSPKFQFLLSKGASASDIVRLVHRCPRILGSSLKNNVIPSFELVRRFLQSDQKTIDCVFGNRPFLQYNVGVQNVNMLLDAGVLDSSIGYLFGRRPSILLSTNLREAIDEVKEMGFDPSKITFAIALHAKRVVSKSRWDAKVDAFKMWGWSEEMVLDSFRKHPLLMLASKDKINEVIRFWVVELGWDPLALAKMPKIFGFSLERRIVPRGLVLKHLIVKGLREKSAKLSTPFDVSEELFLKNYVMRFKEEVCELLKLYQEKISFQEHREGCVESAS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2550 386 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 14 374 - -
Pvu9g2550 386 PANTHER CGI-12 PROTEIN-RELATED 14 374 IPR003690 GO:0003690|GO:0006355
Pvu9g2550 386 Gene3D Transcription termination factor 3, mitochondrial 172 366 IPR038538 -
Pvu9g2550 386 SMART mt_12 199 227 IPR003690 GO:0003690|GO:0006355
Pvu9g2550 386 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Pvu9g2550 386 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Pvu9g2550 386 SMART mt_12 298 332 IPR003690 GO:0003690|GO:0006355
Pvu9g2550 386 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Pvu9g2550 386 Pfam mTERF 183 349 IPR003690 GO:0003690|GO:0006355
Pvu9g2550 386 Pfam mTERF 81 171 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2550 Pvu-Chr9 36022696 36023856 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pvu9g2550 mTERF 1.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2550 K15032 - gmx:100792944 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1079 3 25586045 25588297 Pvu9g2550 9 36022696 36023856 PCT