Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2529 ATGAAAGAAGCGTCAATGAGGATTTCAAACCTTGTTATTGTTCTCCTCCTCTGTTTTTCTTGTGCTCTGCTTTGCCATGGAAATGAGAGCACCATGAGAGTGCTTTTGGAGGTGAAGTCATCGTTCACTGAAGACCCAGAAAATGTTTTGAGTGATTGGTCAGAGAACAACACCGATTACTGCAGTTGGAGAGGGGTGTCATGTGGGTCAAAGAAGCGCCATTTTTTGGATGATGATGACGACTCGGTGCAAGTGGTGGGACTCAACCTGTCCGAGTCATCACTCGGTGGGTCGATATCACCCTCACTCGGTCGTTTGCAAAACCTGCTCCACCTTGATCTCTCTTCTAACCGCCTCGAGGGTCCCATTCCACCTGCCCTCTCCAACCTGACTTCGTTGGAATCTCTCCTTCTCCACTCCAACCAACTCACCGGTCAAATCCCAAGCGAGTTAGACTCGCTAACGCGTCTCCGAGTTTTGCGAATCGGTAACAACCAACTCAGTGGCCCCATTCCCGATACACTTGGATATATGTACAACCTTCGGTACATTGGTTTGGCCTCATGCAGACTCAGTGGTCCTATCCCTGGCAACCTCGCTCGGCTCGCTGAGTTGCAGTATTTGATTCTGCAGGATAACGAGTTGACGGGGCCGATTCCGTTCGAAGTGGGGTACTTCTGGAGCCTTGTAGTCTTCACCGCCGCTGGGAACAGACTCAATGGCTCGATTCCGAGAGAAATGGGTCTAATCTGGAAACTTCAAACTCTGAACCTTGCCAACAACAGCTTAACCGGGTCGATTCCGAGTCAACTCGGGAAGCTAAGTCAGCTTACGTATCTGAATTTCATGGGGAACCAACTCGAGGGTCGTATTCCACCGTCTTTGGCTCAATTGGGTAACCTTCAAAATCTTGACTTATCAAATAATACGCTTAGTGGGGAAATTCCAAAGGAGTTAGGGAAGCTGGGTCAGTTACAATATTTGGTTCTCTCTGGGAACAACCTCTATGGGACCATTCCAAGAACCATATGTTCCAATGCAACAAGTTTGGAGCACTTGATGATAGCAGATAATGTACTTTATGGTGAGATACCAGCTGAGTTGGGTCAGTGCCAATCCCTGAAACAACTTGATTTATCAAGCAATTATCTCAATGGGTCAATACCTACTGAGGTTTATGGGTTGGTGGGGCTAACTGATCTCTTGCTTCACAACAACACTTTGGTTGGTTCAATCTCTCCCTTCATAGGAAACCTCACTGAAATGCAGAATCTTGCACTGTTTCATAACAACTTGCAGGGTAATCTGCCCAGAGAGATTGGGATGCTTGGCAAATTGGAGATAATGTATCTTTATGATAATCAGTTGTCAGGGAAGATTCCTTTGGAGATTGGTAACTGTTCAAGCTTGCAAATGGTTGATTTATTTGGAAACCATTTCAGTGGTGCAATTCCCTTCACTATAGGGAGGCTGAAAGAGTTGAACTTTTTGCACCTTAGGCAGAATGAGCTTGTGGGTGTGATTCCCCCCACACTTGGGAACTGTCATAAACTGGCTGTGCTGGATTTGGCGGATAATCGGCTCCCAGGTGGCATTCCTGCAACATTCGGATTCCTCAAAGAGTTGAAGCAGTTCATGCTCTACAACAATTCTCTTGAAGGTAGTCTTCCTCACCAACTTGTAAATGTAGCAAACCTGACCAGAGTGAATCTTTCAAATAACAGACTGAATGGTAGTTTGGCTGCATTATGTAGCTCTAGCTCCTTTCTTTCTTTTGATGTCACGGATAATGAATTTGACGGTGAGATACCCTTTCTCCTGGGAAATTCACCTTCCCTTGAGAGGCTGAGATTGGGTAACAACAAGTTTTCTGGTGAAATTCCAAGGACATTGGGAAAAATCACCACATTGTCATTGTTAGACGTCTCAGGGAATTCACTCACAGGTCGAATACCAGACGAGCTTTCTCTGTGTACTAACCTGACTCACGTTGATTTAAACAATAATCTTCTAACTGGGCATATACCAACATGGCTTGGAAGTTTGCCTCAGTTGGGAGAGGTTAAGCTCTCATTCAATCAATTTTCTGGGTCTATTCCACTAGGCCTACTCAAACAACCCAATTTGCTGGTTCTTTCCTTGAATAACAATTCTCTTAGTGGAAGTCTCCCAGGTGATATTGGTGATCTTGTGTCTCTTAATACCCTCAGGCTTGACCATAATAACTTCTCTGGGCCAATCCCTCAAGCAATAGGTAAATTGAACAATCTTTACGAGCTGCAGCTATCCAACAATGGCTTTAGTGGGGAAATACCAATTGAGCTTGGAAGTCTCCAAAATGTCCAAAGCATTTTGGACTTAAGTTACAATAATCTCTCTGGTCATATCCCATCTTCACTTGGCATGCTGTCAAAATTGGAAGCACTTAATATTTCTCACAATGAACTCTCTGGAGAAGTGCCTTCAGTAGTTGGTGAAATGACTAGCTTGCAGGAGCTTGACATCTCTTGCAATAACCTTCAAGGTGCATTGGATAAGAAATTCTCCCGCTGGCCAAATGAGTCGTTTGAAGGCAACCATCTTTGTGGAGCATCTCTTGCAAGCTGCAACAGTGGTGATGGTTCCAACAATAAAAGGTGGCAAGACATCATGAGTTCCACAAACAATCTAAGCGACGAGTTTGTTGTTGGTATTGGAGGTTCTGGGACAGTGTACAGAGTTGAATTGCCCTCTGGAGAGATCGTGGCTGTGAAGAAGATTTCAGGAAAAGATGATTATTTGTTGAACAAAAGCTTTATAAGAGAAATCAAGACTTTAGGGAGGATCAAACATAGGCATCTGGTAAAACTGATGGGTTGTTGTAGCAACAGAAACAGAGGAACAGGTTGGAATCTGTTGATATATGAGTATATGGAGAATGGGAATGTTTGGGATTGGTTACATGAGGTGCCCCTCAAAGAAAAGAAGATCCTTGATTGGGACACAAGGTTCAAAATTGCTATAGGATTAACTCACGCAGTGGAGTACCTCCATCACGATTGTGTGCCAAAGATCATTCACAGAGATATCAAATCCAGCAACATATTACTAGATTCCAACATGGAGGCTCACCTGGGAGACTTTGGACTGGCAAAATCACTTGTTGAGAATCCAGAATCTAACACAGAGTCTAATTCTGGCTTTGCTGGATCTTATGGATACATGGCCCCAGAGTATGCATTCTCACTGAAGGGCACAGAGAAAACTGATGTGTACAGCATGGGAGTTGTGCTGATGGAACTTGTTACTGGTAAAATGCCAACAGACGAAGCTTTCAGCGCAGAAATTGACATGGTGAGATGGGTGGAGATGCACCTTAACAAGGAAGGCATTGCGGCTGAAGCAGTGATAGATCCTCAGCTGAAACCCCTTTTGCCTGGTGAAGAGTTTGCTGCATTGCAGGTTCTCCAGATAGCCATACAGTGCACAAAAACTTCACCACAAGAGAGGCCAACATCAAGGCAAGTATGCGATCATCTCCTGCATGTGTCCAACAACAAAATTGTGGATTTTGAGAAGAAGAATCTAGATCATTACTGGTGA 3582 0.4433 MKEASMRISNLVIVLLLCFSCALLCHGNESTMRVLLEVKSSFTEDPENVLSDWSENNTDYCSWRGVSCGSKKRHFLDDDDDSVQVVGLNLSESSLGGSISPSLGRLQNLLHLDLSSNRLEGPIPPALSNLTSLESLLLHSNQLTGQIPSELDSLTRLRVLRIGNNQLSGPIPDTLGYMYNLRYIGLASCRLSGPIPGNLARLAELQYLILQDNELTGPIPFEVGYFWSLVVFTAAGNRLNGSIPREMGLIWKLQTLNLANNSLTGSIPSQLGKLSQLTYLNFMGNQLEGRIPPSLAQLGNLQNLDLSNNTLSGEIPKELGKLGQLQYLVLSGNNLYGTIPRTICSNATSLEHLMIADNVLYGEIPAELGQCQSLKQLDLSSNYLNGSIPTEVYGLVGLTDLLLHNNTLVGSISPFIGNLTEMQNLALFHNNLQGNLPREIGMLGKLEIMYLYDNQLSGKIPLEIGNCSSLQMVDLFGNHFSGAIPFTIGRLKELNFLHLRQNELVGVIPPTLGNCHKLAVLDLADNRLPGGIPATFGFLKELKQFMLYNNSLEGSLPHQLVNVANLTRVNLSNNRLNGSLAALCSSSSFLSFDVTDNEFDGEIPFLLGNSPSLERLRLGNNKFSGEIPRTLGKITTLSLLDVSGNSLTGRIPDELSLCTNLTHVDLNNNLLTGHIPTWLGSLPQLGEVKLSFNQFSGSIPLGLLKQPNLLVLSLNNNSLSGSLPGDIGDLVSLNTLRLDHNNFSGPIPQAIGKLNNLYELQLSNNGFSGEIPIELGSLQNVQSILDLSYNNLSGHIPSSLGMLSKLEALNISHNELSGEVPSVVGEMTSLQELDISCNNLQGALDKKFSRWPNESFEGNHLCGASLASCNSGDGSNNKRWQDIMSSTNNLSDEFVVGIGGSGTVYRVELPSGEIVAVKKISGKDDYLLNKSFIREIKTLGRIKHRHLVKLMGCCSNRNRGTGWNLLIYEYMENGNVWDWLHEVPLKEKKILDWDTRFKIAIGLTHAVEYLHHDCVPKIIHRDIKSSNILLDSNMEAHLGDFGLAKSLVENPESNTESNSGFAGSYGYMAPEYAFSLKGTEKTDVYSMGVVLMELVTGKMPTDEAFSAEIDMVRWVEMHLNKEGIAAEAVIDPQLKPLLPGEEFAALQVLQIAIQCTKTSPQERPTSRQVCDHLLHVSNNKIVDFEKKNLDHYW* 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2529 1193 ProSiteProfiles Protein kinase domain profile. 890 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2529 1193 Pfam Protein kinase domain 895 1172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2529 1193 SUPERFAMILY RNI-like 88 409 - -
Pvu9g2529 1193 PRINTS Leucine-rich repeat signature 301 314 - -
Pvu9g2529 1193 PRINTS Leucine-rich repeat signature 803 816 - -
Pvu9g2529 1193 SUPERFAMILY Protein kinase-like (PK-like) 878 1174 IPR011009 -
Pvu9g2529 1193 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1018 1030 IPR008271 GO:0004672|GO:0006468
Pvu9g2529 1193 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 6 878 - -
Pvu9g2529 1193 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 877 1188 - -
Pvu9g2529 1193 Gene3D Phosphorylase Kinase; domain 1 870 970 - -
Pvu9g2529 1193 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 6 878 - -
Pvu9g2529 1193 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 877 1188 - -
Pvu9g2529 1193 SMART LRR_typ_2 443 467 IPR003591 -
Pvu9g2529 1193 SMART LRR_typ_2 730 754 IPR003591 -
Pvu9g2529 1193 SMART LRR_typ_2 130 153 IPR003591 -
Pvu9g2529 1193 SMART LRR_typ_2 827 858 IPR003591 -
Pvu9g2529 1193 SMART LRR_typ_2 322 346 IPR003591 -
Pvu9g2529 1193 SMART LRR_typ_2 252 274 IPR003591 -
Pvu9g2529 1193 SMART LRR_typ_2 778 803 IPR003591 -
Pvu9g2529 1193 SMART LRR_typ_2 491 515 IPR003591 -
Pvu9g2529 1193 SMART LRR_typ_2 154 178 IPR003591 -
Pvu9g2529 1193 SMART LRR_typ_2 563 586 IPR003591 -
Pvu9g2529 1193 SMART LRR_typ_2 106 129 IPR003591 -
Pvu9g2529 1193 SMART LRR_typ_2 298 321 IPR003591 -
Pvu9g2529 1193 SMART LRR_typ_2 682 706 IPR003591 -
Pvu9g2529 1193 ProSitePatterns Protein kinases ATP-binding region signature. 896 919 IPR017441 GO:0005524
Pvu9g2529 1193 Pfam Leucine rich repeat N-terminal domain 34 68 IPR013210 -
Pvu9g2529 1193 SMART serkin_6 890 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2529 1193 Pfam Leucine Rich Repeat 252 274 IPR001611 GO:0005515
Pvu9g2529 1193 Pfam Leucine Rich Repeat 108 130 IPR001611 GO:0005515
Pvu9g2529 1193 Gene3D Transferase(Phosphotransferase) domain 1 971 1191 - -
Pvu9g2529 1193 Gene3D Ribonuclease Inhibitor 198 291 IPR032675 -
Pvu9g2529 1193 Gene3D Ribonuclease Inhibitor 292 392 IPR032675 -
Pvu9g2529 1193 SUPERFAMILY RNI-like 346 717 - -
Pvu9g2529 1193 SUPERFAMILY L domain-like 652 845 - -
Pvu9g2529 1193 Gene3D Ribonuclease Inhibitor 28 197 IPR032675 -
Pvu9g2529 1193 Gene3D Ribonuclease Inhibitor 393 536 IPR032675 -
Pvu9g2529 1193 Gene3D Ribonuclease Inhibitor 537 869 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2529 Pvu-Chr9 35796534 35801313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2529 34 704 Receptor kinase-like Gene Family AT1G17750 36.726 2.10e-100 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu9g2529 Pkinase 5.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2529 - - gmx:100797153 1382.47