Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2507 ATGATAGGTGAAACTGAGGCTGAGAGTCCCTTAGGTGCACCCAGTATGAGCCCTATGACAGCAGCCAAACCATGCACACCATCTCCATCTGAACACAGCATCAATTTGATGGTTATTTTGGCAGCCATAGTGTGTGCTTGTCTTTGTGCTCTTGGTCTGAACACAATGTTGCAATGTGTGTTCCAATGTGCCAATCGTGTTCTGACTCAACCCTTTCAATGGATTGCCTCAAGGAGACTGAATTCTGGCCTGAAGAAGACAGAAGTGGTGGCTCTGCCAACCTCAACCTACACCCATTCTGGTGGCTCTCCATGTAACTGTGCCATTTGCTTATCAGAGTTCTCTGATGGGGACAACATAAGGTTCCTCCCAAACTGCAATCACCCTTTTCATGTTCATTGCATCGATAAGTGGCTGCTTTCTCACTCTTCTTGCCCAACTTGTAGGAACTTCCTCAAGTCTACTCATTCACTACACTCCTTGCATATTCTAGTATCATAG 501 0.4591 MIGETEAESPLGAPSMSPMTAAKPCTPSPSEHSINLMVILAAIVCACLCALGLNTMLQCVFQCANRVLTQPFQWIASRRLNSGLKKTEVVALPTSTYTHSGGSPCNCAICLSEFSDGDNIRFLPNCNHPFHVHCIDKWLLSHSSCPTCRNFLKSTHSLHSLHILVS* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2507 166 MobiDBLite consensus disorder prediction 1 24 - -
Pvu9g2507 166 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 23 161 - -
Pvu9g2507 166 PANTHER OS06G0666500 PROTEIN 23 161 - -
Pvu9g2507 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 154 IPR013083 -
Pvu9g2507 166 SMART ring_2 107 148 IPR001841 -
Pvu9g2507 166 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Pvu9g2507 166 Pfam Ring finger domain 106 149 IPR001841 -
Pvu9g2507 166 SUPERFAMILY RING/U-box 106 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2507 Pvu-Chr9 35597079 35597579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2507 14 152 C3H Transcription Factor Family AT2G17450 42.763 1.75e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2507 - K19040 vra:106760058 307.375