Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2491 ATGGAGGAGAAAGAAAAAGGAGGGGAAGAAGTGAAGTACCGTGGTGTGAGAAAGAGGCCATGGGGTAAGTTTGGAGCAGAGATCAGAGATCCAAAAAAACCTACGGGAAGACAGTGGTTAGGAACATTTGACACTGCAGAAGAAGCTGCTAGAGCTTATGATCGTGCAGCCATTGAATTGAGAGGTGGCCTTGCAATCCTTAATTTTCCTCATGCATCAGCAAGTTCTTCAACTACAGCCATTGGAACTTCTTCTTCTTCTTCTTCTTCACAGCAGAAGGAAGTTATTGAGTTCGAGTGTTTGGATGATAAGGTTTTGGAAGACCTTCTTGAATCAGAAGTGAAGAGAAGGAACCCAGATTAA 363 0.4325 MEEKEKGGEEVKYRGVRKRPWGKFGAEIRDPKKPTGRQWLGTFDTAEEAARAYDRAAIELRGGLAILNFPHASASSSTTAIGTSSSSSSSQQKEVIEFECLDDKVLEDLLESEVKRRNPD* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2491 120 PRINTS Ethylene responsive element binding protein signature 13 24 IPR001471 GO:0003700|GO:0006355
Pvu9g2491 120 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Pvu9g2491 120 SUPERFAMILY DNA-binding domain 12 71 IPR016177 GO:0003677
Pvu9g2491 120 CDD AP2 12 72 IPR001471 GO:0003700|GO:0006355
Pvu9g2491 120 PANTHER DNA-BINDING DOMAIN 3 114 IPR044808 GO:0003700|GO:0009873
Pvu9g2491 120 SMART rav1_2 12 76 IPR001471 GO:0003700|GO:0006355
Pvu9g2491 120 ProSiteProfiles AP2/ERF domain profile. 12 70 IPR001471 GO:0003700|GO:0006355
Pvu9g2491 120 PANTHER ETHYLENE RESPONSE FACTOR 3 114 - -
Pvu9g2491 120 Pfam AP2 domain 12 62 IPR001471 GO:0003700|GO:0006355
Pvu9g2491 120 Gene3D AP2/ERF domain 11 72 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2491 Pvu-Chr9 35430515 35430877 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2491 10 117 AP2-EREBP Transcription Factor Family AT3G23230 57.724 8.92e-40 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pvu9g2491 AP2 4.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2491 - - gmx:100796977 170.244