Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2490 ATGGAGAAAGAGAGATCATCAGGAGATGAAGAAGTGAAGTATCGTGGTGTGAGAAAGAGACCATGGGGTAAGTTTGGAGCAGAGATTAGAGATCCAACAAAACCTACGGGAAGACAATGGTTGGGGACATTTGACACTGCAGAAGAAGCAGCTAGAGCTTATGATCGTGCAGCCATTGGTTTGAGGGGTGCTCTTGCGATCCTTAATTTTCCCGATGAGTATTATTCTCATCTTCCTTTTGTGTTCTCAAATTCTTCTACTAAGGACAATGGAAGTTCTTTTGCTATGAAGGAAGTTATTGAGTTCGAGTATTTGGATAACAAGGTGTTGGAGGATCTTCTTGAGATAGAAGAGAAGAGAAGGAATAGTGGAGATTAG 378 0.4153 MEKERSSGDEEVKYRGVRKRPWGKFGAEIRDPTKPTGRQWLGTFDTAEEAARAYDRAAIGLRGALAILNFPDEYYSHLPFVFSNSSTKDNGSSFAMKEVIEFEYLDNKVLEDLLEIEEKRRNSGD* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2490 125 CDD AP2 13 72 IPR001471 GO:0003700|GO:0006355
Pvu9g2490 125 PANTHER DNA-BINDING DOMAIN 2 118 IPR044808 GO:0003700|GO:0009873
Pvu9g2490 125 PANTHER ETHYLENE RESPONSE FACTOR 2 118 - -
Pvu9g2490 125 SUPERFAMILY DNA-binding domain 13 73 IPR016177 GO:0003677
Pvu9g2490 125 Pfam AP2 domain 13 63 IPR001471 GO:0003700|GO:0006355
Pvu9g2490 125 ProSiteProfiles AP2/ERF domain profile. 13 71 IPR001471 GO:0003700|GO:0006355
Pvu9g2490 125 Gene3D AP2/ERF domain 12 72 IPR036955 GO:0003700|GO:0006355
Pvu9g2490 125 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Pvu9g2490 125 PRINTS Ethylene responsive element binding protein signature 37 53 IPR001471 GO:0003700|GO:0006355
Pvu9g2490 125 SMART rav1_2 13 77 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2490 Pvu-Chr9 35418233 35418610 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2490 9 121 AP2-EREBP Transcription Factor Family AT3G23230 57.600 4.63e-42 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu9g2490 AP2 4.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2490 - - gmx:100797513 201.445