Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2485 ATGGCAGCGACCAGTTCTTTCTCTCTGCTAAGGAGCTGCGCGCCACTGAAACTAGCAACACCTTTCGCTCGCAAAGCCTCCAACTTCAATCTCCTTCTCCCTCTTCAACAACGCAGGTTGGGCTTTAGTACTCATGCCACGAACAATGAAGAGGCTGCTGCAAAAGCAGCTGCTGTTAATTTTGACAGTGAAGCTCCTACAATATTTGATAAGATCATAAATAAGGAAATCCCTTCGAGTATTGTATACGAGGATGAAAAGGTTCTAGCATTTCGAGATATTAATCCACAGGCTCCAGTTCATGTTCTAGTCATTCCAAAATTTAGAGATGGATTAACACAACTTGGGAAGGCTGATAGTAGACACGGGGAAATATTGGGTCAACTTCTCTATGCTGCAAAAATAGTAGCTGAGAAAGAAGGCATCGTTGATGGATTTCGCGTTGTCATCAACAATGGTCCAAGTGCCTGTCAATCTGTGTATCATCTGCACTTGCATGTATTAGGTGGGAGACAGATGAATTGGCCACCGGGTTGA 537 0.4395 MAATSSFSLLRSCAPLKLATPFARKASNFNLLLPLQQRRLGFSTHATNNEEAAAKAAAVNFDSEAPTIFDKIINKEIPSSIVYEDEKVLAFRDINPQAPVHVLVIPKFRDGLTQLGKADSRHGEILGQLLYAAKIVAEKEGIVDGFRVVINNGPSACQSVYHLHLHVLGGRQMNWPPG* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2485 178 Pfam HIT domain 75 172 IPR011146 GO:0003824
Pvu9g2485 178 ProSitePatterns HIT domain signature. 151 169 IPR019808 -
Pvu9g2485 178 PRINTS Histidine triad family signature 68 84 IPR001310 -
Pvu9g2485 178 PRINTS Histidine triad family signature 89 107 IPR001310 -
Pvu9g2485 178 PRINTS Histidine triad family signature 158 168 IPR001310 -
Pvu9g2485 178 PANTHER HISTIDINE TRIAD HIT PROTEIN 34 178 IPR001310 -
Pvu9g2485 178 SUPERFAMILY HIT-like 66 177 IPR036265 -
Pvu9g2485 178 Gene3D - 46 178 IPR036265 -
Pvu9g2485 178 ProSiteProfiles HIT domain profile. 68 178 IPR011146 GO:0003824
Pvu9g2485 178 PANTHER HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 1 34 178 - -
Pvu9g2485 178 CDD PKCI_related 66 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2485 Pvu-Chr9 35331618 35334740 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2485 - - gmx:100500187 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2485 9 35331618 35334740 Pvu9g2485 9 35331618 35334740 ECH