Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2483 ATGAAGTATATTGGGAGCCACAGCTTGAAGAGGCTTTTCTCGTTTGGAAAACGCGGGTTTGGGGAAGAAAACGATGTGGGGTTGGTGGTTCCTTCATGTGAAGAGCACCCTCCAAGACCCTCTTGGAAATGCTTCTCCTTTAAAGAGTTGTTTGATGCCACCAATGGTTTTAGCTCAGGGAATTTGGTTGGGAGAGGAGGGTATGCAGAGGTTTATAAGGGCACGTTGCGTGGTGGTGAGGAAGTTGCGGTGAAGAGGCTCACCAGAACTTCAACTGACGAGAGGAAGGAGAAGGAGTTTCTGATAGAGATTGGAACAATTGGTCACGTGCGCCATGCCAACGTGTTGCCTCTTCTGGGGTGTTGTATTGACAATGGACTTTACCTCGTTTTTGAGCTATCCACCGTTGGCTCTGTTGCTTCTGTTATTCACGATGAGAACTTGCCTCCTTTAGATTGGAAAACAAGGTATAAGATAGCTCTTGGGACTGCACGTGGTCTTCATTATTTGCACAAAGGCTGCAAGAGGAGGATAATTCACAGGGACATCAAGTCCTCAAACGTTTTGTTAACAGCAGATTTTGAACCAAAGATATCTGATTTTGGACTAGCAAGGTGGCTTCCATCTCAGTGGACTCACCATTCAATAGCCCCAATAGAAGGGACATTTGGGCATTTGGCACCAGAGTACTATATGCATGGAGTTGTGGATGAGAAGACAGATGTATTTGCCTTTGGTGTGTTCTTGCTTGAAATCCTCTCTGGAAGGAAACCAGTGGATGGGTCTCACCAAAGTGTGCACAGCTGGGCTAAACCAATACTAAACAAAGGGGAGATAGAAAAGGTGGTAGATCCAAGGCTTGGAGGGGCTTATGATGTGACACAGTTTAATAGAGTTGCCTTTGCAGCCTCCCTGTGCATTCGGGCATCTGCAACTTGCAGACCTACCATGAGTGAGGTACTGGAGGTAATGGAGGAGTGGGAGATGGATAAAGAGAAGTGGGAAATGGCAGAGGAGAAAGAAGAAGAGGTGGAGCTATGGGGTCTTGAGGATCTGGAATATGCATATGACAGTTCCTTTTCAATGTCACTACCTGACTCAGTTGGAAGTACTTAG 1116 0.4633 MKYIGSHSLKRLFSFGKRGFGEENDVGLVVPSCEEHPPRPSWKCFSFKELFDATNGFSSGNLVGRGGYAEVYKGTLRGGEEVAVKRLTRTSTDERKEKEFLIEIGTIGHVRHANVLPLLGCCIDNGLYLVFELSTVGSVASVIHDENLPPLDWKTRYKIALGTARGLHYLHKGCKRRIIHRDIKSSNVLLTADFEPKISDFGLARWLPSQWTHHSIAPIEGTFGHLAPEYYMHGVVDEKTDVFAFGVFLLEILSGRKPVDGSHQSVHSWAKPILNKGEIEKVVDPRLGGAYDVTQFNRVAFAASLCIRASATCRPTMSEVLEVMEEWEMDKEKWEMAEEKEEEVELWGLEDLEYAYDSSFSMSLPDSVGST* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2483 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Pvu9g2483 371 PANTHER OS08G0249100 PROTEIN 30 348 - -
Pvu9g2483 371 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Pvu9g2483 371 Gene3D Phosphorylase Kinase; domain 1 32 133 - -
Pvu9g2483 371 PANTHER OS04G0654600 PROTEIN 30 348 - -
Pvu9g2483 371 CDD STKc_IRAK 63 326 - -
Pvu9g2483 371 Pfam Protein tyrosine and serine/threonine kinase 60 265 IPR001245 GO:0004672|GO:0006468
Pvu9g2483 371 Gene3D Transferase(Phosphotransferase) domain 1 135 351 - -
Pvu9g2483 371 Coils Coil 324 344 - -
Pvu9g2483 371 SMART serkin_6 57 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2483 371 ProSiteProfiles Protein kinase domain profile. 57 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2483 371 SUPERFAMILY Protein kinase-like (PK-like) 35 328 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2483 Pvu-Chr9 35303745 35307164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2483 34 339 Receptor kinase-like Gene Family AT1G60800 41.956 1.34e-69 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pvu9g2483 PK_Tyr_Ser-Thr 4.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2483 - - gmx:100804983 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1495 3 34085913 34089954 Pvu9g2483 9 35303745 35307164 PCT