Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2482 ATGGCAGAAAATATGAAGAGAAGCAGCTTCGAAGTGTTGGGATTGTGCTGTGCTACAGAAGCAACACTGGTTGAAAGAATTCTGAAGCCTCTTCATGGAGTCAAACATGTTTCAGTGATAGTCCCTACACGAACAGTCACTGTGGTCCATGATGTTCTCTTCATTTCTGAGTCACAAATAGCTGATGCACTAAATGCTGCAAGGCTTGAAGCTAGTTTGAGACTACAGGGAGAGACTGATAATGAAAAGAAATGGCCAGATTTAACTACAATGGTGTGTGGCTTGCTTCTGGCACTTTCTTTCTTGAAATATGTATATCAACCTTTGGAATGGTTGGCACTTGGTTCTGTTGTCATTGGCTTCCCTAAGGTTCTACTCAGGGCCATTGCATCCATTAAGGCTCTGACTCTTAATATCAACATTCTGGTCCTATTGGCAGTGTGTGGTACTGCTGCTTTAAGAGATTTTTGGGAGGCTGGTGTCATCATCTTCTTATTCTCCATTGCTCAATGGCTTGAGACAAGAGCAACTCACAAGGCAAAGGTTGCAATGTCCTCTTTGACTAGCATGGCTCCTCAAAAGGCTGTTATTGCTGAAACTGGGGAACGTGTTGACGTCAATGATGTTAAGATAGACACCATACTTGCAGTGAGGCCGGGTGACGCTATTCCTCTTGATGGAATCGTGGTGGAAGGAAAGTGTGAAGTTGATGAAAAGATGTTAACAGGAGAATCATTACCTGTTATCAAAGAGTTTGATTCAGTAGTATGGGCTGGAACTATTAATGTGAATGGATATATAAGTGTAAAAACTACTGTGCTGGCAAAAGACACAGTGGTGGCTAGAATGTCAAAACTTGTTGAAGAGGCCTCTAGCAGAAAATCTCGAACACAAAGATTCATAGATAATTTTGCTAAGTACTATATTCCTGCTGTTGTTTTGATTTCAGCTAGCATTGCTGTGGTTCCAGCTGCAATAGAAGTTCCTGATATAAAACCTTGGCTCCATCTTGCAATTGTGGTTTTGTTAAGTGCATGCCCCTGTGCTCTCATCCTCTCCACTCCCGTTGCAATCTTTTGTGCTCTCACAAAAGCTGCAACAAGTGGGTTACTACTGAAAGGTGGAGATTATGTTGAAACACTTTCTGGAATTAAGACAGTGGCTTTTGATAAAACTGGCACAATAACAAGAGGAGAGTTCACAGTGACAGATTTTTCATTTGTTGATGACATTAGCATTGAAACTTTACTCTATTGGGTTTCAAGTATTGAGAGTAAATCAAGTCATCCTATGGCAGCTTCACTAGTGGAATACGGAATGTCTCATTCTGTCAGGCCAATCCCTGAAAATGTGGAGAATTTTGAAAACTTTGCTGGGGAAGGAGTTTTCGGTACTATAGATGGGAAGGATATCTATATTGGCAATAGAAGAATTGGTGCTAGAGCTGACTCCGCAAGAGTTGATTGCCACTTGCAATTGCAAAGCCATGAAATTTCTACCCCGAAAGAACACTGTGGACCGACTCTGGTTGGAGTCTTCAGCTTAGTTGATACTTGCAGATCAGGTGCTTTGGAGGCAATAGAAGAGCTAAAGTTGTTAGGCGTGAGATCTGTCATGCTAACAGGAGATAGCAGTCAAGCTGCTATGTATGTTCAAAGTCAGTTGAACCATGGTCTAGACCTTGTACACGCAGAGCTTCTACCTGCGGAAAAGGCAGTGATCATTGAGAATTTGAAGAAAGATGGGCTAATAGCCATGATTGGAGATGGCATAAATGATGCTCCTGCATTAGCCACAGCTGACATTGGTATCTCAATGGGAATATCTGGTTCAGCTCTTGCAAATGAGACAGGCAATGCAATTCTTATGTCGAATGACATCCAAAAGATACCTGAAGCCATTCGGCTTGCAAGGAAAACTACTAGAAAGCTCATTGAGAATGTCATTATTTCAGTTGGCTTCAAGAGTGCTATACTTGCATTGGCAATTGCTGGATACCCTATTGTTTGGCTTGCTGTGTTGACTGATGTTGGGACCTGTTTACTTGTGATTTTCAATAGCATGTTAATTTTACAAGAGACACCAAAATCTGCAAGAAAATCTGCAAGTTCTAAATATGGCACCTTCTTGGAAGATTTGACCACGAATCTACTTGACAATGAAAGTAACAACATTAAGAACCAAGGGTCTGAAAAATGTGGTAAAGATTGTTGTAAAGACGGCCACATAGAAACTACAAGAAGGAATGAATCTTCTGGACTTTTGAAGTTGAGCTCACTCAAGGGAAACCACAGTGGAAACTCAGTCGCTATTGAAGTGCATATAGTGAAACCATGCAATGGTTGGTGTCTAAGCAAAGTAAAAATGTATGAGGACTCTGCATGCAGAACAAATAATGGTTCTGGTTGTTGCCAAGAACAATCTAAGACTGAAAAATGTGCCATTGATTCTGGTTGTTGCCAAGAACAATCTAAGACTGAAAAATGTGTCATTGGTTCTGTTGCTAGAGAAGCTGCCAGCATTGTTTCCTTGGAGTCTGATTGCCTTAAGGACAAGTCTGTGGATATTCCAGAGGTTTCTGGGACAGAAGGTATTCCGAAGTGCTGCAAAAAGACATGCTGTAATGATAGTTTTAACAATATGACTAGCCTTAGCCATCCAGAAATTATTATAGAGTGA 2679 0.4106 MAENMKRSSFEVLGLCCATEATLVERILKPLHGVKHVSVIVPTRTVTVVHDVLFISESQIADALNAARLEASLRLQGETDNEKKWPDLTTMVCGLLLALSFLKYVYQPLEWLALGSVVIGFPKVLLRAIASIKALTLNINILVLLAVCGTAALRDFWEAGVIIFLFSIAQWLETRATHKAKVAMSSLTSMAPQKAVIAETGERVDVNDVKIDTILAVRPGDAIPLDGIVVEGKCEVDEKMLTGESLPVIKEFDSVVWAGTINVNGYISVKTTVLAKDTVVARMSKLVEEASSRKSRTQRFIDNFAKYYIPAVVLISASIAVVPAAIEVPDIKPWLHLAIVVLLSACPCALILSTPVAIFCALTKAATSGLLLKGGDYVETLSGIKTVAFDKTGTITRGEFTVTDFSFVDDISIETLLYWVSSIESKSSHPMAASLVEYGMSHSVRPIPENVENFENFAGEGVFGTIDGKDIYIGNRRIGARADSARVDCHLQLQSHEISTPKEHCGPTLVGVFSLVDTCRSGALEAIEELKLLGVRSVMLTGDSSQAAMYVQSQLNHGLDLVHAELLPAEKAVIIENLKKDGLIAMIGDGINDAPALATADIGISMGISGSALANETGNAILMSNDIQKIPEAIRLARKTTRKLIENVIISVGFKSAILALAIAGYPIVWLAVLTDVGTCLLVIFNSMLILQETPKSARKSASSKYGTFLEDLTTNLLDNESNNIKNQGSEKCGKDCCKDGHIETTRRNESSGLLKLSSLKGNHSGNSVAIEVHIVKPCNGWCLSKVKMYEDSACRTNNGSGCCQEQSKTEKCAIDSGCCQEQSKTEKCVIGSVAREAASIVSLESDCLKDKSVDIPEVSGTEGIPKCCKKTCCNDSFNNMTSLSHPEIIIE* 893
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2482 892 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 5 742 - -
Pvu9g2482 892 Gene3D - 379 638 IPR023214 -
Pvu9g2482 892 SFLD p-type atpase 371 640 IPR044492 -
Pvu9g2482 892 SUPERFAMILY HMA, heavy metal-associated domain 3 73 IPR036163 GO:0046872
Pvu9g2482 892 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 139 691 - -
Pvu9g2482 892 SUPERFAMILY HAD-like 386 688 IPR036412 -
Pvu9g2482 892 ProSitePatterns Hypothetical cof family signature 2. 587 609 - -
Pvu9g2482 892 Gene3D - 177 291 - -
Pvu9g2482 892 ProSitePatterns E1-E2 ATPases phosphorylation site. 390 396 IPR018303 -
Pvu9g2482 892 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 5 742 - -
Pvu9g2482 892 ProSiteProfiles Heavy-metal-associated domain profile. 7 73 IPR006121 GO:0046872
Pvu9g2482 892 Pfam haloacid dehalogenase-like hydrolase 384 601 - -
Pvu9g2482 892 PRINTS P-type cation-transporting ATPase superfamily signature 237 251 - -
Pvu9g2482 892 PRINTS P-type cation-transporting ATPase superfamily signature 388 402 - -
Pvu9g2482 892 PRINTS P-type cation-transporting ATPase superfamily signature 511 522 - -
Pvu9g2482 892 PRINTS P-type cation-transporting ATPase superfamily signature 533 543 - -
Pvu9g2482 892 PRINTS P-type cation-transporting ATPase superfamily signature 587 606 - -
Pvu9g2482 892 PRINTS P-type cation-transporting ATPase superfamily signature 611 623 - -
Pvu9g2482 892 PRINTS Cadmium-transporting ATPase signature 10 19 IPR027256 GO:0006812|GO:0016021|GO:0019829
Pvu9g2482 892 PRINTS Cadmium-transporting ATPase signature 21 42 IPR027256 GO:0006812|GO:0016021|GO:0019829
Pvu9g2482 892 PRINTS Cadmium-transporting ATPase signature 174 194 IPR027256 GO:0006812|GO:0016021|GO:0019829
Pvu9g2482 892 PRINTS Cadmium-transporting ATPase signature 253 269 IPR027256 GO:0006812|GO:0016021|GO:0019829
Pvu9g2482 892 PRINTS Cadmium-transporting ATPase signature 272 286 IPR027256 GO:0006812|GO:0016021|GO:0019829
Pvu9g2482 892 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 139 689 IPR027256 GO:0006812|GO:0016021|GO:0019829
Pvu9g2482 892 Gene3D - 399 519 IPR023299 GO:0000166
Pvu9g2482 892 Gene3D - 2 75 - -
Pvu9g2482 892 Pfam E1-E2 ATPase 198 366 - -
Pvu9g2482 892 SFLD Haloacid Dehalogenase 371 640 - -
Pvu9g2482 892 SUPERFAMILY Calcium ATPase, transduction domain A 202 287 IPR008250 -
Pvu9g2482 892 CDD P-type_ATPase_HM 90 689 - -
Pvu9g2482 892 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 382 IPR023298 -
Pvu9g2482 892 CDD HMA 10 72 IPR006121 GO:0046872
Pvu9g2482 892 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 161 408 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu9g2482 892 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 508 668 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pvu9g2482 Pvu-Chr9 35288970 35294874 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2482 5 822 Primary Pumps ATPases AT2G19110 53.609 0.0 860
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2482 K01534 - gmx:100815324 1425.61