Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2481 ATGTCCTACACCGGCTCTACAACCACAGATAACAGCAACGATTCTGACAATTCGGGAATTGTAATTGCCACTGTCATAGGAGGTTTTGGGTCTGTTTACAAAGGAAGTTTTAGTAATGGAACCATTATAGCTGTGAAAGTTCTACTTGGGAGTTCTGACAAAATAATTGATCAACAGTTTATGGCAGAAGTGGGTACCATTGGTAAAGTACATCATTTCAATCTAGTTCGTCTATATGGGTTTTGCTTTGAAAGAAACCTGAGAGCACTGGTTTATGAGTACATGGTGAATGGGTCGCTTGAAAAGTACCTTTTTCATGAAAGCACAATCTTATCATTTGAAAAGCTCCATGAGATTGCAATTGGTACAGCAAGAGGCATTGCTTACTTGCATGAAGAGTGTCAGCAGAGAATAATCCACTATGATATTAAACCAGGAAATATTCTGTTGGATAGGAACTTTTGTCCTAAAGTTGCTGATTTTGGTTTGGCCAAGCTTTGCAACAGGGATCATACTCACATAAGCATGACTGGGGGTAGGGGGACTCCTGGTTATGCTGCACCTGAACTTTGGATGCCATTTCCTGTTACTCACAAGTGTGATGTTTACAGCTTTGGCATGCTGTTATTTGAAATCATTGGCAGGAGAAAAAACCATAACCTTAACGTTCCAGAAAGTCAGGTTTGGTTTCCAATGTGGGCTTGGGAAAAATTTGGTGCTGGAGAAGTGGGGGAGTTGATAACTTGCTGTGGAATAGAGGACAAAGATAGGGAGATTGCAGAAAGAATTGTTAATATAGCTTTGTTATGTGTTCAACACAGGCCAGAAGCAAGACCTATAATGAGTGTTGTG 852 0.4038 MSYTGSTTTDNSNDSDNSGIVIATVIGGFGSVYKGSFSNGTIIAVKVLLGSSDKIIDQQFMAEVGTIGKVHHFNLVRLYGFCFERNLRALVYEYMVNGSLEKYLFHESTILSFEKLHEIAIGTARGIAYLHEECQQRIIHYDIKPGNILLDRNFCPKVADFGLAKLCNRDHTHISMTGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRKNHNLNVPESQVWFPMWAWEKFGAGEVGELITCCGIEDKDREIAERIVNIALLCVQHRPEARPIMSVV 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2481 284 Gene3D Transferase(Phosphotransferase) domain 1 96 284 - -
Pvu9g2481 284 Gene3D Phosphorylase Kinase; domain 1 26 95 - -
Pvu9g2481 284 PANTHER PUTATIVE-RELATED 26 284 - -
Pvu9g2481 284 SMART serkin_6 20 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2481 284 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Pvu9g2481 284 Pfam Protein tyrosine and serine/threonine kinase 27 282 IPR001245 GO:0004672|GO:0006468
Pvu9g2481 284 ProSiteProfiles Protein kinase domain profile. 18 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2481 284 PANTHER RUST RESISTANCE KINASE LR10-RELATED 26 284 IPR045874 GO:0004672
Pvu9g2481 284 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2481 Pvu-Chr9 35275057 35276258 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2481 27 281 Receptor kinase-like Gene Family AT5G38280 43.893 3.51e-71 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Pvu9g2481 PK_Tyr_Ser-Thr 9.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2481 - - gmx:100305451 485.723