Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2479 ATGAGTTTTCGATTTTCTTCTCCTCCTGACGATTTTCAGACTCAGGCGCAGAACCAGTTTGACCATTTTATGGAATGGACAGTAATAGCCTCCATTGCTTCTGGAGTGGTGGGACTGGTAGCTATTCTAGCAATAGTATATGCCATTGTTGAATGCTTAAAGAAGGCAGGAGAAGCAATTCCTGCATATGCCCAGCTTCCGAGCACAGAGAAGGGTCCTAATAAAGCATCAAATTCGTTTCCTTCAACTGGAGAAGTTGAAGTAGTAATAACACCAGCTTCCACAGTTCAAGGTTCCAAAACTGAGTTTGAAACAATGGAAAGATTCATAAGCAATATCAACAAGGAGAAACCCATCAGATTCTCTCCTGAGGAACTGGATATGATCACATGGAACTACTCAACCATATTGGGTTCAGGTGCTTTTGGGGTTGTCTACAAAGGAGAATTGTCCAATGGAGATGATGTGGCTGTCAAAGTTATCAACAGTTTAGACATGGGAATGGAAGAGCAACTAAAAGCAGAAGTTGGCACCCTTGGAAGAACTTACCATGTCAATCTAGTCAAATTATATGGCTTCTGCTTCCACCGTGAGAAGCGAGCTCTTGTTTATGAGTATGTGGAAAATGGGTCTTTGGACAAGCACTTGTTTGGCAGCCAGAACCAAGACATAGAGTTGGGGAAGCTTCTTGAGATTGCAATTGGAACAGCAAAAGGAATTGCTTATTTGCATGAAGGGTGTCAAAAGAGAATAATTCATTATGATATTAAACCAGAGAATGTTCTTCTTGACATGAACTTGGAACCCAAGGTGGCAGATTTTGGCCTTGCTAAGCTTTGCAGCAGAGAAAGTAACGTTTCAGTGAACACACACTTTAGAGGAACAAGGGGATATGCTGCACCTGAGATGTGGAAGCCTTTTCCAGTGACTCACAAGTGTGATGTTTATAGTTTTGGTATTCTCCTCTTTGAAATGGTTGGGAGGAGAAGGCATTTTGATGATAAGTACAGAGAATCTCAACAATGGCTTCCACAGTGGACATGGGATATGTATGAGAATAATGAGTTGTTGTTAATGCTTTCACTTTGTGGAATTGAAGAGAAAGACAAGGAGAAAGGTGAGAGAATGTCAAAGGTGGCTCTGTGGTGTGTTCAGTATTCACCTGATGATAGACCTCTTATGAGTACTGTGGTGAAGATGCTTGAGGGTGAGATTCAAATTTCTCCACCTCCATTTCCCTTCCAAAACCTGCACTCTGTTAAGCCAAACTTGACTCAGAAAGGAAGCAGTGCTGCAGATTCAGATGCTTCTGAGTCATGGGAAACAACATCAAACTCCAAATCTGGCTCCAAAATCAAGCGCAATGTATTTGAGATCGAAGAACGAACTTAG 1392 0.4174 MSFRFSSPPDDFQTQAQNQFDHFMEWTVIASIASGVVGLVAILAIVYAIVECLKKAGEAIPAYAQLPSTEKGPNKASNSFPSTGEVEVVITPASTVQGSKTEFETMERFISNINKEKPIRFSPEELDMITWNYSTILGSGAFGVVYKGELSNGDDVAVKVINSLDMGMEEQLKAEVGTLGRTYHVNLVKLYGFCFHREKRALVYEYVENGSLDKHLFGSQNQDIELGKLLEIAIGTAKGIAYLHEGCQKRIIHYDIKPENVLLDMNLEPKVADFGLAKLCSRESNVSVNTHFRGTRGYAAPEMWKPFPVTHKCDVYSFGILLFEMVGRRRHFDDKYRESQQWLPQWTWDMYENNELLLMLSLCGIEEKDKEKGERMSKVALWCVQYSPDDRPLMSTVVKMLEGEIQISPPPFPFQNLHSVKPNLTQKGSSAADSDASESWETTSNSKSGSKIKRNVFEIEERT* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2479 463 SUPERFAMILY Protein kinase-like (PK-like) 114 402 IPR011009 -
Pvu9g2479 463 MobiDBLite consensus disorder prediction 418 463 - -
Pvu9g2479 463 Gene3D Phosphorylase Kinase; domain 1 87 206 - -
Pvu9g2479 463 Pfam Protein kinase domain 134 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2479 463 MobiDBLite consensus disorder prediction 418 452 - -
Pvu9g2479 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Pvu9g2479 463 ProSiteProfiles Protein kinase domain profile. 131 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2479 463 PANTHER RUST RESISTANCE KINASE LR10-RELATED 47 431 IPR045874 GO:0004672
Pvu9g2479 463 SMART serkin_6 131 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2479 463 ProSitePatterns Protein kinases ATP-binding region signature. 137 159 IPR017441 GO:0005524
Pvu9g2479 463 Gene3D Transferase(Phosphotransferase) domain 1 207 408 - -
Pvu9g2479 463 PANTHER RECEPTOR SERINE/THREONINE KINASE 47 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2479 Pvu-Chr9 35267126 35269556 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2479 120 451 Receptor kinase-like Gene Family AT5G38280 38.710 3.61e-78 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Pvu9g2479 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2479 - - gmx:100820269 714.916