Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2477 ATGTCCGACGACACCAGCTCTGAAGCGGGTTCGGGAACTGCAATTGCCATTGTCGTAGTAGTTGTCATTATTGTGAAGATTAGTATTTTCTTTTGGGTATTGCCTGAATGCCTAAAAAGATATCGGGCTAATGGTGGTATTGGATCATTTCAACAAAGAGGAACACCAGATAAACAATTTATGACACTCACTATGGATAAATTTCTGAATGATATGGAAAGGGAGAAGCCAATCAGGTTCACTGATCAGCAGCTAAGGATTGCAACTGATAATTACTCTTATCACTTGGGCTCAGGAGGTTTTGGGTCTGTTTACAAAGGAAGTTTTAGTAATGGAACCATTATAGCTGTGAAAGTTCTACTTGGGAGTTCTGACAAAATAATTGATCAACAGTTTATGGCAGAAGTGGGTACCATTGGTAAAGTACATCATTTCAATCTAGTTCGTCTATATGGGTTTTGCTTTGAAAGAAACCTGAGAGCACTGGTTTACGAGTACATGGTGAATGGGTCGCTTGAAAAGTACCTTTTTCATGAAAGCACAATCTTATCATTTGAAAAGCTCCATGAGATTGCAATTGGTACAGCAAGAGGCATTGCTTACTTGCATGAAGAGTGTCAGCAGAGAATAATCCACTATGATATTAAACCAGGAAATATTCTGTTGGATAGGAACTTTTGTCCTAAAGTTGCTGATTTTGGTTTGGCCAAGCTTTGCAACAGGGATCATACTCACATAAGCATGACTGGGGGTAGGGGGACTCCTGGTTATGCTGCACCTGAACTTTGGATGCCATTTCCTGTAACTCACAAGTGTGATGTTTACAGCTTTGGCATGCTGTTATTTGAAATCATTGGCAGGAGAAAAAACCATAACATCAACGTTCCAGAGAGTCAGGTTTGGTTTCCAATGTGGGCTTGGGAAAAATTTGCAGCTGGAGATGTGGGGGAGTTGATAACTTGCTGTGGAATAGAGGACAAAGATAGGGAGATTGCAGAAAGAATTGTTAATGTAGCTTTGTTATGCGTTCAACACAGGCCAGAAGCAAGACCTATAATGAGTGTTGTG 1068 0.4045 MSDDTSSEAGSGTAIAIVVVVVIIVKISIFFWVLPECLKRYRANGGIGSFQQRGTPDKQFMTLTMDKFLNDMEREKPIRFTDQQLRIATDNYSYHLGSGGFGSVYKGSFSNGTIIAVKVLLGSSDKIIDQQFMAEVGTIGKVHHFNLVRLYGFCFERNLRALVYEYMVNGSLEKYLFHESTILSFEKLHEIAIGTARGIAYLHEECQQRIIHYDIKPGNILLDRNFCPKVADFGLAKLCNRDHTHISMTGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRKNHNINVPESQVWFPMWAWEKFAAGDVGELITCCGIEDKDREIAERIVNVALLCVQHRPEARPIMSVV 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2477 356 Gene3D Transferase(Phosphotransferase) domain 1 167 356 - -
Pvu9g2477 356 ProSitePatterns Protein kinases ATP-binding region signature. 96 118 IPR017441 GO:0005524
Pvu9g2477 356 ProSiteProfiles Protein kinase domain profile. 90 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2477 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Pvu9g2477 356 PANTHER RUST RESISTANCE KINASE LR10-RELATED 16 356 IPR045874 GO:0004672
Pvu9g2477 356 Gene3D Phosphorylase Kinase; domain 1 64 166 - -
Pvu9g2477 356 SMART serkin_6 90 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2477 356 SUPERFAMILY Protein kinase-like (PK-like) 73 354 IPR011009 -
Pvu9g2477 356 PANTHER PUTATIVE-RELATED 16 356 - -
Pvu9g2477 356 Pfam Protein tyrosine and serine/threonine kinase 94 354 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2477 Pvu-Chr9 35260046 35261319 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2477 79 353 Receptor kinase-like Gene Family AT5G38280 42.199 4.52e-74 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Pvu9g2477 PK_Tyr_Ser-Thr 9.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2477 - - gmx:100305451 549.666