Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu9g2476 | ATGGAAAGAGAAAAGCCAATGAGGTTTACTGGGGAGCTGCTTAGGATTGCAACAGATAATTACTCTGTATCGTTGGGGTCAGGAGGTTTTGGAGAAGTTTACAAAGGAAGTTTAAGTGATGGAACAACTGTGGCTGTGAAGGTTCTACGAGCAAATTCTTACAAGAGAATTGAGGAACAGTTCATGGCAGAAGTGGGTACAATTGGAAAAGTTCATCATTTCAACCTAGTAAAGTTGTATGGATTTTGCTTTGAAAAAGAGCTGAGAGCACTGGTTTATGAGTACATGAAGAATGGATCTCTTGACAAGTATCTGTTTCATGAAAACAAGACCCTTGGATATGAAAAGCTTCATGAGATTGCAGTTGGAACAGCCAGAGGAATTTCATACTTGCATGAAGATTGTGAACAAAGAATAGTCCACTGTGACATCAAACCAGGAAATATTCTCTTGGACAACAACTTCAATCCTAAAGTTGCTGATTTTGGATTAGCTAAACTCTGCAACAGGGACCATTCTCATATAACCATGACAGGAGGTAGGGGGACTCCTGGTTATGCTGCACCTGAGCTTTGGATGCCATTTCCTGTGACTCACAAGTGTGATGTTTACAGCTTTGGAATGCTGTTATTTGAAATCATAGGAAGGAGAAGAAACCTTGACATTAACCTTCCCCAAAGTGAAGAGTGGTTTCCAGTATGGGCTTGGAAAAGATTTGATGGTGGAGAATTGGAAGTGTTGATAAATGCTTGTAAGATTGAGGAGAGGTATATGAAAATGGCTGAAAGAATGGTGAAGGTAGCTTTGTCTTGTGTTCAATATAGGCCAGAATCAAGGCCAATTATGAGTGATGTGGTGAAAATGTTGGAAGGTTCAGTAGAAATTTCTAAACCCTCTAACCCATTTCAGCATATCATAGGTGGAACTTTCCAGACTCATTCTGTCCATGCATCCCAAACTGATGTTAATACAAGTATCAATTCCAGCTCTTCTTTTAAGTTTATTTATTTTTTTATGGATAAAAAAAACCAACCAGGCATTGTTTATGACATTCATCATCAGGGGAATGAGGACATTGAATTGGCATTTAACAGAATGGAACTTCTGCATTTCTTCAGTAACTGA | 1125 | 0.3884 | MEREKPMRFTGELLRIATDNYSVSLGSGGFGEVYKGSLSDGTTVAVKVLRANSYKRIEEQFMAEVGTIGKVHHFNLVKLYGFCFEKELRALVYEYMKNGSLDKYLFHENKTLGYEKLHEIAVGTARGISYLHEDCEQRIVHCDIKPGNILLDNNFNPKVADFGLAKLCNRDHSHITMTGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRRNLDINLPQSEEWFPVWAWKRFDGGELEVLINACKIEERYMKMAERMVKVALSCVQYRPESRPIMSDVVKMLEGSVEISKPSNPFQHIIGGTFQTHSVHASQTDVNTSINSSSSFKFIYFFMDKKNQPGIVYDIHHQGNEDIELAFNRMELLHFFSN* | 375 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu9g2476 | 374 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 139 | 151 | IPR008271 | GO:0004672|GO:0006468 | |
Pvu9g2476 | 374 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 95 | - | - | |
Pvu9g2476 | 374 | Pfam | Protein tyrosine and serine/threonine kinase | 24 | 289 | IPR001245 | GO:0004672|GO:0006468 | |
Pvu9g2476 | 374 | ProSitePatterns | Protein kinases ATP-binding region signature. | 25 | 47 | IPR017441 | GO:0005524 | |
Pvu9g2476 | 374 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 1 | 313 | IPR045874 | GO:0004672 | |
Pvu9g2476 | 374 | SMART | serkin_6 | 19 | 289 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu9g2476 | 374 | SUPERFAMILY | Protein kinase-like (PK-like) | 6 | 290 | IPR011009 | - | |
Pvu9g2476 | 374 | Gene3D | Transferase(Phosphotransferase) domain 1 | 96 | 303 | - | - | |
Pvu9g2476 | 374 | ProSiteProfiles | Protein kinase domain profile. | 19 | 303 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu9g2476 | 374 | CDD | STKc_IRAK | 25 | 291 | - | - | |
Pvu9g2476 | 374 | PANTHER | PUTATIVE-RELATED | 1 | 313 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu9g2476 | Pvu-Chr9 | 35255572 | 35256831 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu9g2476 | 8 | 302 | Receptor kinase-like Gene Family | AT5G38280 | 43.894 | 1.51e-76 | 247 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-Os | Pvu9g2476 | PK_Tyr_Ser-Thr | 1.7e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu9g2476 | - | - | gmx:100776445 | 588.186 |