Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2475 ATGTCAAGTGCTGCAGCAATTGGGGCAACAGTGGTTGTTGTGGGGATTTTCTTGAAGATAGGTATTTTGATTTGTGTGTGCAGAAAAAGAAATCAGAAGAATGATAGATCAGTAGTTTCAGGTTCAAAATTTCTGACTCGGACTATGGATAAATTTCTCAATGACATGGAAAGGGAGAAACCAATCAGATTCACTGGTCAACAACTAAGGATTGCCACTGACAACTACTCTCACTTGTTGGGATCAGGAGGTTTTGGAACAGTTTATAAGGGAATTTTTAGCAATGGGACCATTGTTGCTGTGAAGGTTCTTCGAGGGAATTCAGACAAGAAAATCGAGGAGCAGTTTATGGCAGAAGTGGGTACCATTGGCAGAATTCATCATTTTAATCTTGTTAGACTCTATGGATTTTGCTTTGAAGAAAAGCTGATAGCACTGGTGTATGAGTACATGAGTAATGGCTCTCTTGATAGGTATTTGTTCCATGAAAAGAAGACCATAGGATATGAAAAGCTTCATGAGATTGCAGTGGGAACAGCTAGAAGCATTGCTTATTTGCATGAGGAGTGCCAACACAGAATAATCCATTACGACATAAAACCAGGAAACATTCTCTTGGACAGGAATTACAATCCTAAAGTTGCTGATTTCGGTTTAGCCAAACTTTGCAACAGGGACAATACTCACATAACCATGACTGGAGGCAGGGGAACTCCAGGTTATGCAGCACCTGAGCTTTGGATGCCCTTTCCCATAACTCCCAAGTGTGATGTTTATAGTTTTGGCATGCTGCTATTTGAAATCGTAGGCAGAAGAAGAAACATTGATATCAAACTTGCTGGAAGCCAAGAGTGGTTTCCAATATGGGTTTGGGAAAAATTTGATTCTGCACAACTGGGGGAGTTGATGATAGTGTGTGGGATAGAGGAGGAGAAAGCTAAGGAGATTGCAGAAAGAATGATTAAGATAGCTTTTTGGTGTGTTCAGTATAGGCCAGAATTAAGGCCTATAATGAGTGTTGTGGTGAAAATGCTGGAAGGTTCAGTGGAAATTCCAGGACCTGACAACCCGTTTCAGCACTTCATGGGTGGGGTTACCATTGCTCATCCAGTACCAGTGTCACAAACCTATAATACAAGTTTTTCATCTGGTTCTTCTGTTATGGTAACAAACTCCAGCATTGGATGTGGTACTCCTATTATGAGGAAGTACGACATTGAATTAGCCTCTACCAATGAGTGA 1242 0.409 MSSAAAIGATVVVVGIFLKIGILICVCRKRNQKNDRSVVSGSKFLTRTMDKFLNDMEREKPIRFTGQQLRIATDNYSHLLGSGGFGTVYKGIFSNGTIVAVKVLRGNSDKKIEEQFMAEVGTIGRIHHFNLVRLYGFCFEEKLIALVYEYMSNGSLDRYLFHEKKTIGYEKLHEIAVGTARSIAYLHEECQHRIIHYDIKPGNILLDRNYNPKVADFGLAKLCNRDNTHITMTGGRGTPGYAAPELWMPFPITPKCDVYSFGMLLFEIVGRRRNIDIKLAGSQEWFPIWVWEKFDSAQLGELMIVCGIEEEKAKEIAERMIKIAFWCVQYRPELRPIMSVVVKMLEGSVEIPGPDNPFQHFMGGVTIAHPVPVSQTYNTSFSSGSSVMVTNSSIGCGTPIMRKYDIELASTNE* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2475 413 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2475 413 SMART serkin_6 74 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2475 413 Pfam Protein kinase domain 78 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2475 413 Gene3D Transferase(Phosphotransferase) domain 1 151 351 - -
Pvu9g2475 413 ProSitePatterns Protein kinases ATP-binding region signature. 80 102 IPR017441 GO:0005524
Pvu9g2475 413 Gene3D Phosphorylase Kinase; domain 1 48 150 - -
Pvu9g2475 413 PANTHER PUTATIVE-RELATED 1 411 - -
Pvu9g2475 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Pvu9g2475 413 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 411 IPR045874 GO:0004672
Pvu9g2475 413 SUPERFAMILY Protein kinase-like (PK-like) 53 346 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2475 Pvu-Chr9 35252897 35254249 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2475 63 358 Receptor kinase-like Gene Family AT5G38280 40.717 1.80e-74 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Pvu9g2475 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2475 - - gmx:100803355 698.353