Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2456 ATGCTGCATTTCTTTATTTCTTGTTCATTTCTTTGTGTGATTTCTTACTTTGTCTTGTGGATAGTTAAAAGACAAAAGCCTGTTGAGGAAAAACATTTGTTAGACAACTGCACTCCTCAAACAAAGTATGATGTTTTTGTTAGTTTTAGAGGTGAGGACATCCGCGACGGGTTTCTTAGCCATTTGATCATGGATTTTGAGAGGAAGAAAATAAATGCATTCGTAGATGTTAAACTTGAGAGGGGAGATGAAGTATGGTCATCACTTGTTGGAGCAATTAAAGGGTCATCCATTTCATTGATCATATTCTCACAAGACTATGCTTCTTCTCATTGGTGTTTAGAAGAGCTTGTGACAATACTTGAATGTAGAGATAAGTATGGACAGATTCTAATCCCTGTTTTCTACAAAGTTGAACCCACAGATGTACGATATCAATCATCCAAGAGTTACCAAAATGCATTTGCTAAGCATCAAAGAAGATATGAGACCAACAAGGTGCAAATCTGGAGAGATTCTTTGAAGAAATCTACTCAAATATCAGGAATTGCATCATCAAAATATCCGGTTGATGCTGAGCTGGTTAAAGAAATAGTGAAGGTTGTTCTTGAAAAGTTAGCTAAACCCTCAGTTAACTTGAAAAGATTGGTTGGAATTGACGAAAAAATTGCAACTGTTGAATCACTGATAGGAAAAGAACCAGAAGACACACGTCTTATTGGAATTTGGGGCATGGGAGGTATGGGAAAAACAACTCTCGTGGAAGAAGTGTTTAATAAACTGAAGTTTAAATACGATGCTTCTTGTTTTTTAGCCAATGAGAGAGACCAATCAAACAAACATGGAATAATTCCTTTGAAGAAAAGTATTTTTTCTAAACTATTAGGATATGAAGTGGATATTGACACACCAAATTCGTTGCCTGAAGATATTGTTAGGAGAATTGGTGGTATGAAGGTTCTTATTGTTCTTGATGATGTGAATGATTTAGAACACGTAGAGAAATTACTGGGATCTCTTGATAACTTTGAATCAGGTAGTAGAGTAATTGTGACAACCAGAAATAGGCAAGTGCTAAAGGCTAACAAATTTGATGAGGAGTATCAGCTTAGAAAATTCAGTTTCGATGAAGCACTTCAACTTTTCAATTTGAATGTCTTTAAAAATAGTGATCATCAAAGGGAGTACAATGAGCTTTCAGAAAGGGTGGTGAATTATTCCCAAGGTGTTCCTTTAGTGGTTAAAGTTTTGGCTGCTCGTCTACGTGGAAACGAAAAGGAAGTATGGGAAAGTGAGTTAGACAGGCTTAAAAAAATGCCTCTTAGAGAAGTTTATGATGTCCTAAAATGGAGTTATGATGATCTAGATCGTAAAGAGCAACAAGTTTTTCTAGATTTGGCATGTTTCTTTCTTAGACTGCGAAAATCAGTGAATGTGGGTTCTATAAAATCGTTATTGAAAGATGGAGAAAGAGATAATTCAGTGGCTGTTGATTTGAAAAGGCTTGAAGATAGAGCTCTCATAACAATTTCTAACGAGCACAGTTTACATGAAATGGTTTTGGAGATTGTTCAATGTAAGTCAAGTGAGGATAATGTTGTTTTTATGCATGATAGTGTTCAAGAAATGGCTTGGGAGATTGTTCGTAGAGAGTCTAGCAGACCTGCAAGTCGTAGCAGATTGTGGGATCCTGATGATGTTTATGAAGCATTGAAAGATAACAAGGGAAATGAGTCCATTAGAAGCATACGAATTCAATTGTCAACAATTAAGAAGCAAAAGTTAAGCCCTCAAATATTTGCCAAGATGAGCATGCTACAATTTCTGGAAATTTCTGGGAACTGCAATGATGATTTATTCCATCAACATTATATTCTTGCTGAAGGGCTTCAACTTTTGGCCACTGAGCTAAAATTTCTTTACTGGGATCATTACCCTCTAAAATCCTTGCCAGAAAATTTTTCTACAGAAAAGCTTGTAATATTGTCATTGCAGCAAGGCAGTGTGGAAAAACTTTGGGATGGTGTGAAGAATTTGGTAAATTTAAGAGAACTTGACCTCAATAGTTCTCTCAAATTAAAGGAGGTACCAGATTTATGGAAAGCCACAAATCTTGAAGTAGTGGATCTCATGTGTTGTTCTATGGTAAAAGCACTTCCCTCATTTGAACATCAAAGCAAGCTTAGAATTTTAGATTTAAGCTATTGCAACAAGCTTGAAGCAATACCAGAGCTTCCCTTGTTACTAAAGACTCTAGATGTTCATAGTTGCAAATCCCTTCAAACTCTACCAGAGTTTCCTATGTCCCTTGAAACTTTAGATGTTAGAGGTTGCCATTCTCTTCAAACTCTACCCGAGCTCCCCCTATCCCTTGAAATTCTAGACACAGAATTTTGCACTTCACTTCTATCTCTGCCAAAGCTTCCTCGGTCCCTCAAGACTCTCAAAGCAACAAAATGTGAATCTCTTCAAGTTCTACCAAAGCTCCCCCTAACCTTGGAAACACTAGAAGCCACAAAATGTGGATCTCTTCAAACTCTACCAGAGCTTCCCCAATTCCTTACAACTCTAGATGTCAATGGTTGCAAATCTCTGCAAACTTTACCAAAACTTCCCATGACCCTTAAAAATCTGGATGTTAGACACTGTGAGCATCTTCAAACTCTTCCAAATCTTCCACTCTCCCTTGAAAGTCTAGATTTTAAAGGTTGTGAATCTCTCCGAGCTCTACCAAAGCTTCCCCAGTTCCTTAATACCCTAGATGTCAGTGGTTGCATGTCTCTTCAAACTTTACCAGAATTTCCCTTGTTCCTTGAAACTCTAGATGCCAGGGGTTGTGAATCTCTTCAAACTTTACCAGAGCTTCCCATGTGCCTTAAATCTCTAGATGTTAGTGGTTGTGTATCCCTTCAAACTTTACCTGAGCTTCCTCTATCCCTTGAAACTTTAGATGTTAGAGGTTGTGAATCTCTTCAAATTCTACCAAAACTTCCCCTATCCTTAGGAACTCTAGATGTCAAAGGCTTTGAACCTCTCCAAACTTTACCAGAACTTCCCCTATCCCTTGAGACTTTAGAGGTAAGAGGTTGTGAATTTGTTCAAGAAGTAGTAGATCTTCCATTGTCAGTTGAAACTCTAGATACAAAATTATGCATTTCACTTAAGAATGCAAAAACTCTTCCTTCATCTCTTAAAACACTACAAGTCACTGACTGTGAGTCTCTTCAAACCTTGCCTGAGCTTCCTCATTCCCTCATAACACTAAATACCCAATATTGCTCTTCACTTCAAACACTTCCTGAGCTTCCACAGTACCTTAAAACCCTAAATGTCATACGTTGTCAGTCACTTCTTTGTCTACCTGATCTTCCATTATGCCTTGAAACACTAGAAGTCACAGAATGTGAATCTCTTCAAAATTTTCCAGAACTTCCCCAATTCCTTAAAACTCTAGATGTCAATGGTTGCAAATCTCTTCAAACATTACCAGATCTTCCCTTGAGGCTTGAAACTCTAGATGTCAGAGGTTGTGAATCTCTTCAAACCATACCTAAGCTTCCCTTGTCCCTTGAAACTTTGGATGTGAGAGGATGTGAATCTCTTCAAAAGCTACAAAACCTTCCTTTGTCCCTTGAAACTCTAGATGTCACAGGTTGTGAATCTCTTCAAATTATAATAGAGTTTCCCCAATCTCTTAAAACTCTACAAGCCACAAATTGTGAATCTCTTCAAACTTTACCGAAGTTTCCCCATTCACTTAAAACTTTAGATCTTAATGGTTGCAAATCTCTTCAAACTCTACCAGAGCTTCCCCTATCCCTTGAGACTTTAGATGTTAGATGTTGTGATTCTCTTCTAACTCTACCTGAGCTTCCTCTTTCACTTCAAAATCTAGATATCAGAGGTTGTGAATCTCTTGAAACTCTACCAGAGCTTCCCATGTCCCTTAAATCATTAGATTTCAGAGCTTGTGAATCTCTTGAAGCTCTACCAGAACTCCCCTTGTCCCTTGAAAATCTAGATGTTCGAGGTTGTGAAACTCTTCAAAGTCTACCAAAGCTTCCATTTTCATTGAAAATTCTACAAGCTACAGAATGTGAATCTCTTCAAACTCTTCCAGAGCTGCCCCCATTCCTTAAAATTCTAGATGTCAATGGTTGTAAGTCTCTTCAATTTCTACCACATCTTCCCCTATCCATTGAAACTCTAGATATCAGAGGTTGTGAATCTCTTGAAGCTCTACCAGAACTCCCCTTGTCCCTTGAAACTCTAGATACAGAACTATGCACTTCACTTCAAACTTTTGCAAAGTTTCCTCCTTCCCTTAAAACTCTTGAAGCCACAGTTTGTGAATCTCTTCAAACTTTACCAGAGCTTCCTTGGACCCTTCAAACTCTTAATGTCCAATATTGTTCTTCACTTCAAAATTTACCAAAGCTTCCCTTATCCCTTAAAACACTAAATGTTTCATGTTGCCAATCAATGGAGAGTCTGCCAGAGCTTCCACCATCCCTTGAAACTCTAGATGTCAGTGGTTGCATTTCCATTCAGACTTTACCAAAGCTTCCCGTGTCACTTAAAGCTCTAAATGCTAAAGATTGTGAATCTTTGAAGACCGTATTGTTTCCTTCAACAACAGTTGAACAATTAAAGGAAAATAGGAAATGGCTTCTGTTCTGGAATTGCTTGAACTTAGATGAACATTCACTACTTGCTATGGGGTTGAATTCACGAATCAACGTTACGAAATTTGCAAATCACCACCTATCTTCACCAAATCATGATGATGTGGAAAATTACAATGATTATGATGATAAATATGGTTCTTATCAAGCTGGTTACATATATCCAGGAAGCAGTATGGTAGAGTGGTTGGAGAATAAGACAACAAAGGATTATTTAATCATTGATCTGTCTTCTCCTGCCTTTTCCCCCAGGTTGGGCTTTATTTTCTGCTTCATCCTTGATAAGTGTCAAGACACAGAAATGTTTGGAAAACTTGAAGTTAACCTCATCATAAGTGATGGTGATGGAGAGGGTCAAAAGGACACTGTTGGAATGTACATAGATATTGCCTGGACAATTGAATCAGATCATGTGTGTGTGATATACGACCAAAGATGTTCTGACATGCTAAATAGGAGGGCTAACATTCAAACAAGGTTTAAAATCCAGGTTTCAAAAGGGATTCAAACCAGTGACACAGGAACTGGCATACTGTCCAAACTTGCTTTCAAAGGATTTGGGGTGAGCCCTATCAGCACCTCAGCATATAAAAGTTTCATTCAACAAATGGAATTGCATGATTCAATATTTCAATTTCATCAAAAAAATTGA 5337 0.3774 MLHFFISCSFLCVISYFVLWIVKRQKPVEEKHLLDNCTPQTKYDVFVSFRGEDIRDGFLSHLIMDFERKKINAFVDVKLERGDEVWSSLVGAIKGSSISLIIFSQDYASSHWCLEELVTILECRDKYGQILIPVFYKVEPTDVRYQSSKSYQNAFAKHQRRYETNKVQIWRDSLKKSTQISGIASSKYPVDAELVKEIVKVVLEKLAKPSVNLKRLVGIDEKIATVESLIGKEPEDTRLIGIWGMGGMGKTTLVEEVFNKLKFKYDASCFLANERDQSNKHGIIPLKKSIFSKLLGYEVDIDTPNSLPEDIVRRIGGMKVLIVLDDVNDLEHVEKLLGSLDNFESGSRVIVTTRNRQVLKANKFDEEYQLRKFSFDEALQLFNLNVFKNSDHQREYNELSERVVNYSQGVPLVVKVLAARLRGNEKEVWESELDRLKKMPLREVYDVLKWSYDDLDRKEQQVFLDLACFFLRLRKSVNVGSIKSLLKDGERDNSVAVDLKRLEDRALITISNEHSLHEMVLEIVQCKSSEDNVVFMHDSVQEMAWEIVRRESSRPASRSRLWDPDDVYEALKDNKGNESIRSIRIQLSTIKKQKLSPQIFAKMSMLQFLEISGNCNDDLFHQHYILAEGLQLLATELKFLYWDHYPLKSLPENFSTEKLVILSLQQGSVEKLWDGVKNLVNLRELDLNSSLKLKEVPDLWKATNLEVVDLMCCSMVKALPSFEHQSKLRILDLSYCNKLEAIPELPLLLKTLDVHSCKSLQTLPEFPMSLETLDVRGCHSLQTLPELPLSLEILDTEFCTSLLSLPKLPRSLKTLKATKCESLQVLPKLPLTLETLEATKCGSLQTLPELPQFLTTLDVNGCKSLQTLPKLPMTLKNLDVRHCEHLQTLPNLPLSLESLDFKGCESLRALPKLPQFLNTLDVSGCMSLQTLPEFPLFLETLDARGCESLQTLPELPMCLKSLDVSGCVSLQTLPELPLSLETLDVRGCESLQILPKLPLSLGTLDVKGFEPLQTLPELPLSLETLEVRGCEFVQEVVDLPLSVETLDTKLCISLKNAKTLPSSLKTLQVTDCESLQTLPELPHSLITLNTQYCSSLQTLPELPQYLKTLNVIRCQSLLCLPDLPLCLETLEVTECESLQNFPELPQFLKTLDVNGCKSLQTLPDLPLRLETLDVRGCESLQTIPKLPLSLETLDVRGCESLQKLQNLPLSLETLDVTGCESLQIIIEFPQSLKTLQATNCESLQTLPKFPHSLKTLDLNGCKSLQTLPELPLSLETLDVRCCDSLLTLPELPLSLQNLDIRGCESLETLPELPMSLKSLDFRACESLEALPELPLSLENLDVRGCETLQSLPKLPFSLKILQATECESLQTLPELPPFLKILDVNGCKSLQFLPHLPLSIETLDIRGCESLEALPELPLSLETLDTELCTSLQTFAKFPPSLKTLEATVCESLQTLPELPWTLQTLNVQYCSSLQNLPKLPLSLKTLNVSCCQSMESLPELPPSLETLDVSGCISIQTLPKLPVSLKALNAKDCESLKTVLFPSTTVEQLKENRKWLLFWNCLNLDEHSLLAMGLNSRINVTKFANHHLSSPNHDDVENYNDYDDKYGSYQAGYIYPGSSMVEWLENKTTKDYLIIDLSSPAFSPRLGFIFCFILDKCQDTEMFGKLEVNLIISDGDGEGQKDTVGMYIDIAWTIESDHVCVIYDQRCSDMLNRRANIQTRFKIQVSKGIQTSDTGTGILSKLAFKGFGVSPISTSAYKSFIQQMELHDSIFQFHQKN* 1779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2456 1778 Gene3D Ribonuclease Inhibitor 1312 1427 IPR032675 -
Pvu9g2456 1778 Gene3D - 373 456 IPR042197 -
Pvu9g2456 1778 SMART till_3 42 180 IPR000157 GO:0007165
Pvu9g2456 1778 SUPERFAMILY L domain-like 1399 1539 - -
Pvu9g2456 1778 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 210 466 IPR027417 -
Pvu9g2456 1778 SMART LRR_bac_2 746 766 - -
Pvu9g2456 1778 SMART LRR_bac_2 767 787 - -
Pvu9g2456 1778 SMART LRR_bac_2 725 745 - -
Pvu9g2456 1778 SMART LRR_bac_2 1124 1144 - -
Pvu9g2456 1778 SMART LRR_bac_2 1397 1417 - -
Pvu9g2456 1778 SMART LRR_bac_2 1145 1165 - -
Pvu9g2456 1778 SMART LRR_bac_2 935 955 - -
Pvu9g2456 1778 SMART LRR_bac_2 1229 1249 - -
Pvu9g2456 1778 SMART LRR_bac_2 1250 1270 - -
Pvu9g2456 1778 SMART LRR_bac_2 872 892 - -
Pvu9g2456 1778 SMART LRR_bac_2 1292 1312 - -
Pvu9g2456 1778 SMART LRR_bac_2 1313 1333 - -
Pvu9g2456 1778 SMART LRR_bac_2 1376 1396 - -
Pvu9g2456 1778 SMART LRR_bac_2 1481 1501 - -
Pvu9g2456 1778 SMART LRR_bac_2 1082 1102 - -
Pvu9g2456 1778 SMART LRR_bac_2 1502 1522 - -
Pvu9g2456 1778 SMART LRR_bac_2 998 1018 - -
Pvu9g2456 1778 SMART LRR_bac_2 1271 1291 - -
Pvu9g2456 1778 SMART LRR_bac_2 1103 1123 - -
Pvu9g2456 1778 SMART LRR_bac_2 977 997 - -
Pvu9g2456 1778 SMART LRR_bac_2 1355 1375 - -
Pvu9g2456 1778 SMART LRR_bac_2 830 850 - -
Pvu9g2456 1778 SMART LRR_bac_2 809 829 - -
Pvu9g2456 1778 SMART LRR_bac_2 893 913 - -
Pvu9g2456 1778 SMART LRR_bac_2 1460 1480 - -
Pvu9g2456 1778 SMART LRR_bac_2 956 976 - -
Pvu9g2456 1778 SMART LRR_bac_2 1061 1081 - -
Pvu9g2456 1778 SMART LRR_bac_2 851 871 - -
Pvu9g2456 1778 SMART LRR_bac_2 1166 1186 - -
Pvu9g2456 1778 SMART LRR_bac_2 914 934 - -
Pvu9g2456 1778 SMART LRR_bac_2 1334 1354 - -
Pvu9g2456 1778 SMART LRR_bac_2 1439 1459 - -
Pvu9g2456 1778 Pfam NB-ARC domain 228 453 IPR002182 GO:0043531
Pvu9g2456 1778 Gene3D - 40 203 IPR035897 -
Pvu9g2456 1778 ProSiteProfiles TIR domain profile. 41 206 IPR000157 GO:0007165
Pvu9g2456 1778 Pfam TIR domain 42 207 IPR000157 GO:0007165
Pvu9g2456 1778 SUPERFAMILY L domain-like 587 934 - -
Pvu9g2456 1778 SUPERFAMILY Toll/Interleukin receptor TIR domain 38 182 IPR035897 -
Pvu9g2456 1778 Gene3D - 204 367 IPR027417 -
Pvu9g2456 1778 SUPERFAMILY L domain-like 1084 1417 - -
Pvu9g2456 1778 Gene3D Ribonuclease Inhibitor 563 907 IPR032675 -
Pvu9g2456 1778 Gene3D Ribonuclease Inhibitor 1071 1286 IPR032675 -
Pvu9g2456 1778 Gene3D Ribonuclease Inhibitor 908 1055 IPR032675 -
Pvu9g2456 1778 ProSiteProfiles Leucine-rich repeat profile. 727 749 IPR001611 GO:0005515
Pvu9g2456 1778 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1345 1770 IPR044974 GO:0006952
Pvu9g2456 1778 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 38 740 IPR044974 GO:0006952
Pvu9g2456 1778 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 38 740 - -
Pvu9g2456 1778 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 1345 1770 - -
Pvu9g2456 1778 Gene3D Ribonuclease Inhibitor 1428 1601 IPR032675 -
Pvu9g2456 1778 SUPERFAMILY "Winged helix" DNA-binding domain 443 572 IPR036390 -
Pvu9g2456 1778 PRINTS Disease resistance protein signature 239 254 - -
Pvu9g2456 1778 PRINTS Disease resistance protein signature 314 328 - -
Pvu9g2456 1778 PRINTS Disease resistance protein signature 407 421 - -
Pvu9g2456 1778 PRINTS Disease resistance protein signature 723 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2456 Pvu-Chr9 34993650 34999881 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2456 217 923 WRKY Transcription Factor Family AT5G45050 30.258 2.00e-82 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2456 - - vun:114164115 2922.11