Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2418 ATGGCACTGGATATGCTCGATCTTCTTCCCAGAACAAGGATGGAGGAACAGTTAGCAATTCAAGAAGCTGCTTCGGCTGGTTTGAAAAGCATGGAGCATCTCATTCGACTCCTTTCTCCCTCTGCCTGCAACTCTTCTTCTTTTTCTTCTTCTTCTAACAACAGCAACAACAACGTTAGCCTTAACAACCTTGACTGCTCCGAAATCACCGACTTCACCGTCTCTAAGTTCAAACAAGTCATTAACCTTCTCAACCGCACCGGTCACGCTCGCTTCCGCCGTGCACCGACCCAGGCCCAGGCCCAGCCGCAACCAGAGCCACAACCACAACCACAACCACAACCTCAATCCCAACCAGGCTTTACTTTGGATTTCGTTAAACCCACCATTCTCAACTCTAAGCCCTGCAACAAAGACGAAACCCTCACTCTTTCCACCACCCCCACCACCTCCTCTTCCTTCTTATCCTCCGTCACCAACGACGCCAGCGTCTCCGACGGCAAGATCGGCCCTTTCCTCCCTCCCTCCGCCGCCAAACCCCCTCTATGCTCCTCCCACAGGAAAAAGTGCCGCGACGCCGCGCTGTCCGCCAAACCCTCCTGCCACTGCTCCAAGAAAAGGAAATCACGCGTGAAAAAAACGATCCGCGTTCCGGCGATAAGTTCCAAGATCGCCGACATCCCACCGGACGAGTACTCGTGGAGAAAGTACGGCCAGAAACCGATCAAGGGTTCACCTTTTCCTCGTGGGTACTACAAGTGCAGCACCGTGAAAGGGTGTCCGGCGAGGAAGCACGTGGAGCGCGCGCAAGATGACCCGAAGATGCTGATAGTGACGTACGAGGGCGAGCACCATCACGCGCTGCCGTTACCTGCCGCAACCGGCGTTGGTTTCGGGCTCTGA 903 0.5493 MALDMLDLLPRTRMEEQLAIQEAASAGLKSMEHLIRLLSPSACNSSSFSSSSNNSNNNVSLNNLDCSEITDFTVSKFKQVINLLNRTGHARFRRAPTQAQAQPQPEPQPQPQPQPQSQPGFTLDFVKPTILNSKPCNKDETLTLSTTPTTSSSFLSSVTNDASVSDGKIGPFLPPSAAKPPLCSSHRKKCRDAALSAKPSCHCSKKRKSRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPFPRGYYKCSTVKGCPARKHVERAQDDPKMLIVTYEGEHHHALPLPAATGVGFGL* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2418 300 MobiDBLite consensus disorder prediction 134 160 - -
Pvu9g2418 300 Pfam Plant zinc cluster domain 183 226 IPR018872 -
Pvu9g2418 300 Gene3D WRKY domain 218 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g2418 300 MobiDBLite consensus disorder prediction 102 116 - -
Pvu9g2418 300 ProSiteProfiles WRKY domain profile. 223 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g2418 300 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 291 IPR044810 GO:0003700
Pvu9g2418 300 SUPERFAMILY WRKY DNA-binding domain 226 289 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g2418 300 SMART WRKY_cls 228 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g2418 300 MobiDBLite consensus disorder prediction 94 160 - -
Pvu9g2418 300 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 10 291 - -
Pvu9g2418 300 Pfam WRKY DNA -binding domain 230 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2418 Pvu-Chr9 34493623 34495359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2418 6 299 WRKY Transcription Factor Family AT2G24570 49.123 6.42e-91 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu9g2418 WRKY 1.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2418 - - gmx:100127391 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2418 9 34493623 34495359 Pvu9g2418 9 34493623 34495359 ECH
Pvu3g1446 3 33212871 33214510 Pvu9g2418 9 34493623 34495359 PCT