Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2412 ATGACTCTCCGAGTACTCCAAGAAGCTTCACCCTCTAATAGGACAACACAACACAAATCTGAAGCATTGTTTTACATCCTCGGAGGAATTATTGTGCTGGCCATCGTGTTGATTTTTTTATATGTATTTCGGAAGCGTATAAAACGGCAACCACAGAATATGACAGTTACAACTACAGAGAAGCAAGGGATTATGAAACACAATGAATCAGCAGATATGATGAAGATGATATTTTCATCTAATCCACAGTCAGGGTCCATGGAGTTCTTTAGTGGGAACCTTAGAACAATTAACTGCTTTGACTACCAGACACTGAAAAATGCAACCACGAATTTCCATGCTGATAATTTTCTTGGAAGTGGTGGATTTGGACCTGTTTACAAGGGAAAGTTGGTAGATGGAAGGCTAATTGCGGTTAAGAAATTGTCTCTCAACAAATCCCAGCAGGGAGAAAAAGAGTTTCTGGTAGAGGTGAGAACAATCACTAGTATCCAACACAAAAATCTGGTTCGCCTTCTTGGATGCTGCATAGATGGGCCACAAAGGATAATTGTCTATGAATACATGAAAAACAGAAGTTTGGACCTCTTTATACATGAAAACAGTGATCAATTTCTGAAATGGGGAACTAGATTCCAAATTATTCTGGGAGTAGCGCGAGGACTACAATACCTTCACGAGGATTCACACCAAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGACAAGCTTCAGCCAAGGATTGGGGACTTTGGGCTAGCTAGATTTTTCCCCGAAGACCAAGCTTACCTTAGCACACAGTTCGCTGGAACACTAGGTTATACTGCTCCTGAATATGCCATTAGAGGGGAATTATCAGAAAAGGTAGATATCTATAGTTTTGGAGTACTCTTGCTTGAAATAATCTGTTGCAGGAAAAACACAGACCAAACTTTGCCATCAGAAATGCAGTACCTCCCTGAATATGCATGGAAACTGTACGAGAATGCAAGGATATTGGACATAGTAGATCCTAAGCTGCGACAAGATGGATTCGTAGAAAAGGATGTTATGCAAGCAATCCACGTGGCTTTCTTATGTCTTCAACCTGATCCACAATTGAGGCCTCCCATGTCAGAAATTGTGGCATTGTTGACTTTCAAAATTGAAATGGTGACAACACCAATGAGGCCAGCCTTTCTGGATCGAAGACCAGGAAAGGATGATGAAAACCATTGTTTGAGAGGATTATCTGAGGGTTTAACATCTCCCATATGA 1272 0.4072 MTLRVLQEASPSNRTTQHKSEALFYILGGIIVLAIVLIFLYVFRKRIKRQPQNMTVTTTEKQGIMKHNESADMMKMIFSSNPQSGSMEFFSGNLRTINCFDYQTLKNATTNFHADNFLGSGGFGPVYKGKLVDGRLIAVKKLSLNKSQQGEKEFLVEVRTITSIQHKNLVRLLGCCIDGPQRIIVYEYMKNRSLDLFIHENSDQFLKWGTRFQIILGVARGLQYLHEDSHQRIVHRDIKASNILLDDKLQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKVDIYSFGVLLLEIICCRKNTDQTLPSEMQYLPEYAWKLYENARILDIVDPKLRQDGFVEKDVMQAIHVAFLCLQPDPQLRPPMSEIVALLTFKIEMVTTPMRPAFLDRRPGKDDENHCLRGLSEGLTSPI* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2412 423 SUPERFAMILY Protein kinase-like (PK-like) 90 386 IPR011009 -
Pvu9g2412 423 CDD STKc_IRAK 118 384 - -
Pvu9g2412 423 Gene3D Transferase(Phosphotransferase) domain 1 189 392 - -
Pvu9g2412 423 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 91 396 - -
Pvu9g2412 423 ProSiteProfiles Protein kinase domain profile. 112 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2412 423 Gene3D Phosphorylase Kinase; domain 1 71 188 - -
Pvu9g2412 423 SMART serkin_6 112 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2412 423 PANTHER RECEPTOR-LIKE KINASE 91 396 - -
Pvu9g2412 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Pvu9g2412 423 Pfam Protein tyrosine and serine/threonine kinase 115 382 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2412 Pvu-Chr9 34411855 34415844 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2412 100 399 Receptor kinase-like Gene Family AT1G56120 48.667 3.69e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu9g2412 PK_Tyr_Ser-Thr 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2412 - - gmx:100799624 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1427 3 33006422 33009758 Pvu9g2412 9 34411855 34415844 PCT