Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2399 ATGGGGGTGATTCTACAGCTGTTGAAGCTCTGCGTCATTGGCTTTGTTGTGGCATTCGAAGGATCTCAAGGGTCAATTATATCCCCATCTCCAGCATTTCTTCCAGTCATTCATCCTAGTGGAGAAGCACCTGCTCCTATCCATCTTGGATTGTCATGGGGAAGCAGTCCACCAAGATCACCTTCAGATCCAAATGGGTTTGTTATATCCCCATCTCCAGAAACCATACATGTGAATTCTTCCCCCAGTGAAGCACCTGGTCTTGTACACCTAAAAGAACCATGGAGAACCATTGCACCAAGCCCTCAAGAAGTACCAAATGGGCCATTCTTGTCCCCTTCGGTTACATTACCACCTCCTAAATCAGCTCCAACTCCTGAGAAGACAAAAGAATCTGAACCATCCATATCTCCTAGTCCTGGTGCAAGTACCATAACATCATCATCACCGCCATATAATGCTGCTCCTGGACCATCAACTGCAGAAGGGAATGTTTCACCATCCATACAACTAAGTCCACCTCAAAGCAAAACACCTGCTTTTAGTCCTCCTGTTTTCACACCAATTGCTCCAGCTCCCTTTGCAATACCTTCAGGCAATTCACCAAAAACTTCACCAGTCAGCCAACCAATTGAACATGGAAGTTTCCCTCCTAAGATTGATGAGAGGAATAAGAGTCACAAGCCTGAGCCAGCATTTCCAGCCGTAGTTCCAATACCTTCTACTGAGTTGCCCAAATATTCACCAGTAAGCCAACCAAATGAAAATGGAAGTTTGCCTCATAAGGAGGGTGCTAATAATGGTCACAACCCCGAGCCAATTTCACCAGCCCCTTTAGTATTCAGTTTTCCTGAACATCCACCAGTGAGTCAGCCAACTGAACATGGAAGTTCGCCTCCAACTGTTCCCAGTGGGGATATCAACACAGGTCACACATTGGAGCCAGTTTCACACGCCCCAGTTGCAACATCTCCTACAAATTTGCCAAAAAATTCACCAGTCAGTCAACCAACTCATGGAAGTTTCCCACCTGATCTTCACAATGGAACTGCAAATAATGGTCACACTCACACCCCAGCACCAAAAATGTCATTTACACCACCAAGTCCATTTCCTGTAGATCCACCATTGGTCCACCCATTCATACCAGCAGCATCTCCATCCAAATCACCAGCACCTATTGTGTCTCCTGCATTGACTCCTTCCAGAAGCTTTAGTTGGAAAAAAGGTGGAGAGCCAGTTTCTGCACCTGTGTACAAAACACCAAAGCCACTACCGGGTATAGTACATGACCATACTCAAGCACCTGTTGTCTCTCCTGCATTAACACCTTCTAGAAGCTTCAATTGGAAAAAAGGTGGAGAACCAGTTTCTGCTCCTCCATACAAAATACCAAAGCCACTTCCGGCTATAGTGCATTCCCCTGCTCAAGCTCCTTCTGCACCTGAAGCAAGGCAATTTCACTATGCTCCTGAGCCATCTCCTAACAAAGATCATCCTCCTGCTTCTTCACCATCAACCACATTCTATAAGCATCACCACACAAGGAACATAATCAACAGCCCTGCTCCTGCATCATCATATTCAGTTTCTCCTTCCACTTTAAAACACCAAGATGAACCAATTCCTCCCTCATTGCTACCAGCAAGTAGGCAAAGACATCATGCTCCATCACCATTGAGCACAGGTTCCACACTTTCCCCGTTTGCGTTCCCTATTCAGTCACCAATAAGCCAGATTTCACCAGCTCCTTCTCCATCATTCAAAATACCCCCCCACTCAACCAAAATTCCATTTCATCCTCCTGAAGTATCCCCTTTTCGGCCTTCTTCCCAGAGCCCAAAGAAGCCGGTCCTACCTCGTATTCAAGCACTGCCACCCCCACCTCCCAATGAAGATTGTATATCACTGGTTTGCTCAGATCCCTATACAAATACTCCACCTGGAGCACCTTGCAAATGTGTGTGGCCCATGAAAGTCAGTCTTCGCCTTAGTGTTTCTTTGTATACTTTCTTCCCTTTGGTTTCAGAGTTTGCTTCTGAAATTGCCATTGGGGTTTTCATGAATCAAAGTCAAGTTCGCATTATGGGAGCTGATGCAGCTAACCTGCAACCTGATAAAACTATTGTATTCATTGATTTGGTACCACTTGAGGAAAAGTTTGATAAACCTACAGCCTTTTTAACTTCTGAGAGATTTTGGCACAAACAGGTTGCTATAAAGACTTCTTACTTTGGTGATTATGACGTATTATATGTGAGCTATCCAGGTTTGCCTCCATCCCCTCCTTTACCTCCTTCAAGCATTACAATTGTTGATGGTGGTCCATATTCGGGTGGTGGCAATAACAGTAGGACCATAAAGCCCCTTGGGGTTGACATATCAAAGAGGCAGCATAAAGGTGGACTTAGCAAGGGCATCATTGCTATTATTTCTCTCTCAGTTTTTCTAGTGGTTGTTTTATGCTTTGCTGCTGCTTGGGCCTTGTTCAAGTTCAGAGATCATGCAAGTAAACTGGCATCAACCCCACGTGTTCTGTCTCCTTCACTTACCAAAGCACCAGGTGCTGCTGGATCAGCAGTTGGAGGCAGGCTTGCTTCAGCTTCGACATCATTCCGGTCTAGCATTGCTGCTTATACAGGATCTGCGAAGACTTTCAGCATGAATGACATTGAGAAAGCCACAGATAATTTCCATGACTCCAGGGTACTTGGAGAAGGTGGTTTTGGGCGTGTTTATAGTGGTATACTTGAAGATGGGACAAAAGTGGCAGTCAAGGTTCTGAAAAGAGAGGATCATCATGGTGACCGTGAATTCCTATCAGAAGTAGAGATGCTTAACCGCCTTCACCATAGAAACTTGGTTAAGTTGATCGGTATATGCACAGAGGTCAGCTTCCGGTGCCTGGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTACATGGGGTGGACAAGGAAAACAGCCCCCTTGATTGGAGTGCTCGGATAAAGATAGCACTCGGCTCTGCTCGTGGACTGGCTTATTTGCATGAAGATTCAAGTCCTCATGTCATACATAGAGACTTCAAGTCTAGTAATATCTTGCTGGAAGAAGATTTTACACCAAAAGTATCCGATTTTGGATTGGCCCGAACAGCAGCTGATGAGGAGAACAGACACGTATCAACACGTGTAATGGGAACTTTCGGTTATGTGGCTCCAGAGTATGCAATGACCGGGCATCTTCTTGTGAAGAGTGATGTTTACAGCTATGGTGTTGTCCTCCTTGAGCTCTTGACTGGAAGAAAACCAGTAGACATGTCACGATCTCCCGGTCAAGAGAATCTCGTTGCGTGGGCTCGTCCATTGCTCTCAAGCGAAGAAGGAGTGAAAGCAATAATAGATCCATCTCTGGGACCTGATGTGCCTTCTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTACAACCAGAGGTTTCTGACCGTCCCTTTATGGGTGAGGTTGTTCAGGCTTTAAAACTAGTGTGCAATGAATGTGATGAGGCAAGAGAAGCAGGCTCAAGTTCTACCTCTGTTGATTTGAGTCATTCTAGACAAGTATCAGATAATTTCCAAGGCCAATCCTCAGCCACCAATTACGATTCTGGAGTTGATATTGAAAATGGACTGTTGGCATCAGAGTTATTCAGCTCATCATCCGCTAGATATGGAAAGCGAGTGTCAGGGTCATTTAGAAGACATTCTTATTCAGGTCCTCTGAATACTGGAAGAAGCAAACGATTATGGCAGATAATTAGAAAGTTTTCTGGTGGTAGTGTCAGTGAACATGGAACTATGTTCAAGTTATGA 3846 0.4498 MGVILQLLKLCVIGFVVAFEGSQGSIISPSPAFLPVIHPSGEAPAPIHLGLSWGSSPPRSPSDPNGFVISPSPETIHVNSSPSEAPGLVHLKEPWRTIAPSPQEVPNGPFLSPSVTLPPPKSAPTPEKTKESEPSISPSPGASTITSSSPPYNAAPGPSTAEGNVSPSIQLSPPQSKTPAFSPPVFTPIAPAPFAIPSGNSPKTSPVSQPIEHGSFPPKIDERNKSHKPEPAFPAVVPIPSTELPKYSPVSQPNENGSLPHKEGANNGHNPEPISPAPLVFSFPEHPPVSQPTEHGSSPPTVPSGDINTGHTLEPVSHAPVATSPTNLPKNSPVSQPTHGSFPPDLHNGTANNGHTHTPAPKMSFTPPSPFPVDPPLVHPFIPAASPSKSPAPIVSPALTPSRSFSWKKGGEPVSAPVYKTPKPLPGIVHDHTQAPVVSPALTPSRSFNWKKGGEPVSAPPYKIPKPLPAIVHSPAQAPSAPEARQFHYAPEPSPNKDHPPASSPSTTFYKHHHTRNIINSPAPASSYSVSPSTLKHQDEPIPPSLLPASRQRHHAPSPLSTGSTLSPFAFPIQSPISQISPAPSPSFKIPPHSTKIPFHPPEVSPFRPSSQSPKKPVLPRIQALPPPPPNEDCISLVCSDPYTNTPPGAPCKCVWPMKVSLRLSVSLYTFFPLVSEFASEIAIGVFMNQSQVRIMGADAANLQPDKTIVFIDLVPLEEKFDKPTAFLTSERFWHKQVAIKTSYFGDYDVLYVSYPGLPPSPPLPPSSITIVDGGPYSGGGNNSRTIKPLGVDISKRQHKGGLSKGIIAIISLSVFLVVVLCFAAAWALFKFRDHASKLASTPRVLSPSLTKAPGAAGSAVGGRLASASTSFRSSIAAYTGSAKTFSMNDIEKATDNFHDSRVLGEGGFGRVYSGILEDGTKVAVKVLKREDHHGDREFLSEVEMLNRLHHRNLVKLIGICTEVSFRCLVYELIPNGSVESHLHGVDKENSPLDWSARIKIALGSARGLAYLHEDSSPHVIHRDFKSSNILLEEDFTPKVSDFGLARTAADEENRHVSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSRSPGQENLVAWARPLLSSEEGVKAIIDPSLGPDVPSDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAREAGSSSTSVDLSHSRQVSDNFQGQSSATNYDSGVDIENGLLASELFSSSSARYGKRVSGSFRRHSYSGPLNTGRSKRLWQIIRKFSGGSVSEHGTMFKL* 1282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2399 1281 CDD STKc_IRAK 904 1172 - -
Pvu9g2399 1281 Gene3D Phosphorylase Kinase; domain 1 870 973 - -
Pvu9g2399 1281 MobiDBLite consensus disorder prediction 245 263 - -
Pvu9g2399 1281 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 456 1281 - -
Pvu9g2399 1281 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1020 1032 IPR008271 GO:0004672|GO:0006468
Pvu9g2399 1281 Gene3D Transferase(Phosphotransferase) domain 1 974 1197 - -
Pvu9g2399 1281 MobiDBLite consensus disorder prediction 437 565 - -
Pvu9g2399 1281 MobiDBLite consensus disorder prediction 177 191 - -
Pvu9g2399 1281 Pfam Protein tyrosine and serine/threonine kinase 901 1171 IPR001245 GO:0004672|GO:0006468
Pvu9g2399 1281 SUPERFAMILY Protein kinase-like (PK-like) 878 1171 IPR011009 -
Pvu9g2399 1281 MobiDBLite consensus disorder prediction 319 362 - -
Pvu9g2399 1281 MobiDBLite consensus disorder prediction 291 311 - -
Pvu9g2399 1281 MobiDBLite consensus disorder prediction 55 82 - -
Pvu9g2399 1281 MobiDBLite consensus disorder prediction 129 176 - -
Pvu9g2399 1281 ProSiteProfiles Protein kinase domain profile. 898 1174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2399 1281 MobiDBLite consensus disorder prediction 384 412 - -
Pvu9g2399 1281 MobiDBLite consensus disorder prediction 52 87 - -
Pvu9g2399 1281 ProSitePatterns Protein kinases ATP-binding region signature. 904 926 IPR017441 GO:0005524
Pvu9g2399 1281 MobiDBLite consensus disorder prediction 1186 1210 - -
Pvu9g2399 1281 MobiDBLite consensus disorder prediction 99 371 - -
Pvu9g2399 1281 PANTHER OS01G0750732 PROTEIN 456 1281 - -
Pvu9g2399 1281 MobiDBLite consensus disorder prediction 501 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2399 Pvu-Chr9 34266522 34277495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2399 376 1277 Receptor kinase-like Gene Family AT5G56890 55.792 0.0 876
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pvu9g2399 PK_Tyr_Ser-Thr 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2399 - - gmx:100802309 2028.83