Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu9g2399 | ATGGGGGTGATTCTACAGCTGTTGAAGCTCTGCGTCATTGGCTTTGTTGTGGCATTCGAAGGATCTCAAGGGTCAATTATATCCCCATCTCCAGCATTTCTTCCAGTCATTCATCCTAGTGGAGAAGCACCTGCTCCTATCCATCTTGGATTGTCATGGGGAAGCAGTCCACCAAGATCACCTTCAGATCCAAATGGGTTTGTTATATCCCCATCTCCAGAAACCATACATGTGAATTCTTCCCCCAGTGAAGCACCTGGTCTTGTACACCTAAAAGAACCATGGAGAACCATTGCACCAAGCCCTCAAGAAGTACCAAATGGGCCATTCTTGTCCCCTTCGGTTACATTACCACCTCCTAAATCAGCTCCAACTCCTGAGAAGACAAAAGAATCTGAACCATCCATATCTCCTAGTCCTGGTGCAAGTACCATAACATCATCATCACCGCCATATAATGCTGCTCCTGGACCATCAACTGCAGAAGGGAATGTTTCACCATCCATACAACTAAGTCCACCTCAAAGCAAAACACCTGCTTTTAGTCCTCCTGTTTTCACACCAATTGCTCCAGCTCCCTTTGCAATACCTTCAGGCAATTCACCAAAAACTTCACCAGTCAGCCAACCAATTGAACATGGAAGTTTCCCTCCTAAGATTGATGAGAGGAATAAGAGTCACAAGCCTGAGCCAGCATTTCCAGCCGTAGTTCCAATACCTTCTACTGAGTTGCCCAAATATTCACCAGTAAGCCAACCAAATGAAAATGGAAGTTTGCCTCATAAGGAGGGTGCTAATAATGGTCACAACCCCGAGCCAATTTCACCAGCCCCTTTAGTATTCAGTTTTCCTGAACATCCACCAGTGAGTCAGCCAACTGAACATGGAAGTTCGCCTCCAACTGTTCCCAGTGGGGATATCAACACAGGTCACACATTGGAGCCAGTTTCACACGCCCCAGTTGCAACATCTCCTACAAATTTGCCAAAAAATTCACCAGTCAGTCAACCAACTCATGGAAGTTTCCCACCTGATCTTCACAATGGAACTGCAAATAATGGTCACACTCACACCCCAGCACCAAAAATGTCATTTACACCACCAAGTCCATTTCCTGTAGATCCACCATTGGTCCACCCATTCATACCAGCAGCATCTCCATCCAAATCACCAGCACCTATTGTGTCTCCTGCATTGACTCCTTCCAGAAGCTTTAGTTGGAAAAAAGGTGGAGAGCCAGTTTCTGCACCTGTGTACAAAACACCAAAGCCACTACCGGGTATAGTACATGACCATACTCAAGCACCTGTTGTCTCTCCTGCATTAACACCTTCTAGAAGCTTCAATTGGAAAAAAGGTGGAGAACCAGTTTCTGCTCCTCCATACAAAATACCAAAGCCACTTCCGGCTATAGTGCATTCCCCTGCTCAAGCTCCTTCTGCACCTGAAGCAAGGCAATTTCACTATGCTCCTGAGCCATCTCCTAACAAAGATCATCCTCCTGCTTCTTCACCATCAACCACATTCTATAAGCATCACCACACAAGGAACATAATCAACAGCCCTGCTCCTGCATCATCATATTCAGTTTCTCCTTCCACTTTAAAACACCAAGATGAACCAATTCCTCCCTCATTGCTACCAGCAAGTAGGCAAAGACATCATGCTCCATCACCATTGAGCACAGGTTCCACACTTTCCCCGTTTGCGTTCCCTATTCAGTCACCAATAAGCCAGATTTCACCAGCTCCTTCTCCATCATTCAAAATACCCCCCCACTCAACCAAAATTCCATTTCATCCTCCTGAAGTATCCCCTTTTCGGCCTTCTTCCCAGAGCCCAAAGAAGCCGGTCCTACCTCGTATTCAAGCACTGCCACCCCCACCTCCCAATGAAGATTGTATATCACTGGTTTGCTCAGATCCCTATACAAATACTCCACCTGGAGCACCTTGCAAATGTGTGTGGCCCATGAAAGTCAGTCTTCGCCTTAGTGTTTCTTTGTATACTTTCTTCCCTTTGGTTTCAGAGTTTGCTTCTGAAATTGCCATTGGGGTTTTCATGAATCAAAGTCAAGTTCGCATTATGGGAGCTGATGCAGCTAACCTGCAACCTGATAAAACTATTGTATTCATTGATTTGGTACCACTTGAGGAAAAGTTTGATAAACCTACAGCCTTTTTAACTTCTGAGAGATTTTGGCACAAACAGGTTGCTATAAAGACTTCTTACTTTGGTGATTATGACGTATTATATGTGAGCTATCCAGGTTTGCCTCCATCCCCTCCTTTACCTCCTTCAAGCATTACAATTGTTGATGGTGGTCCATATTCGGGTGGTGGCAATAACAGTAGGACCATAAAGCCCCTTGGGGTTGACATATCAAAGAGGCAGCATAAAGGTGGACTTAGCAAGGGCATCATTGCTATTATTTCTCTCTCAGTTTTTCTAGTGGTTGTTTTATGCTTTGCTGCTGCTTGGGCCTTGTTCAAGTTCAGAGATCATGCAAGTAAACTGGCATCAACCCCACGTGTTCTGTCTCCTTCACTTACCAAAGCACCAGGTGCTGCTGGATCAGCAGTTGGAGGCAGGCTTGCTTCAGCTTCGACATCATTCCGGTCTAGCATTGCTGCTTATACAGGATCTGCGAAGACTTTCAGCATGAATGACATTGAGAAAGCCACAGATAATTTCCATGACTCCAGGGTACTTGGAGAAGGTGGTTTTGGGCGTGTTTATAGTGGTATACTTGAAGATGGGACAAAAGTGGCAGTCAAGGTTCTGAAAAGAGAGGATCATCATGGTGACCGTGAATTCCTATCAGAAGTAGAGATGCTTAACCGCCTTCACCATAGAAACTTGGTTAAGTTGATCGGTATATGCACAGAGGTCAGCTTCCGGTGCCTGGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTACATGGGGTGGACAAGGAAAACAGCCCCCTTGATTGGAGTGCTCGGATAAAGATAGCACTCGGCTCTGCTCGTGGACTGGCTTATTTGCATGAAGATTCAAGTCCTCATGTCATACATAGAGACTTCAAGTCTAGTAATATCTTGCTGGAAGAAGATTTTACACCAAAAGTATCCGATTTTGGATTGGCCCGAACAGCAGCTGATGAGGAGAACAGACACGTATCAACACGTGTAATGGGAACTTTCGGTTATGTGGCTCCAGAGTATGCAATGACCGGGCATCTTCTTGTGAAGAGTGATGTTTACAGCTATGGTGTTGTCCTCCTTGAGCTCTTGACTGGAAGAAAACCAGTAGACATGTCACGATCTCCCGGTCAAGAGAATCTCGTTGCGTGGGCTCGTCCATTGCTCTCAAGCGAAGAAGGAGTGAAAGCAATAATAGATCCATCTCTGGGACCTGATGTGCCTTCTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTACAACCAGAGGTTTCTGACCGTCCCTTTATGGGTGAGGTTGTTCAGGCTTTAAAACTAGTGTGCAATGAATGTGATGAGGCAAGAGAAGCAGGCTCAAGTTCTACCTCTGTTGATTTGAGTCATTCTAGACAAGTATCAGATAATTTCCAAGGCCAATCCTCAGCCACCAATTACGATTCTGGAGTTGATATTGAAAATGGACTGTTGGCATCAGAGTTATTCAGCTCATCATCCGCTAGATATGGAAAGCGAGTGTCAGGGTCATTTAGAAGACATTCTTATTCAGGTCCTCTGAATACTGGAAGAAGCAAACGATTATGGCAGATAATTAGAAAGTTTTCTGGTGGTAGTGTCAGTGAACATGGAACTATGTTCAAGTTATGA | 3846 | 0.4498 | MGVILQLLKLCVIGFVVAFEGSQGSIISPSPAFLPVIHPSGEAPAPIHLGLSWGSSPPRSPSDPNGFVISPSPETIHVNSSPSEAPGLVHLKEPWRTIAPSPQEVPNGPFLSPSVTLPPPKSAPTPEKTKESEPSISPSPGASTITSSSPPYNAAPGPSTAEGNVSPSIQLSPPQSKTPAFSPPVFTPIAPAPFAIPSGNSPKTSPVSQPIEHGSFPPKIDERNKSHKPEPAFPAVVPIPSTELPKYSPVSQPNENGSLPHKEGANNGHNPEPISPAPLVFSFPEHPPVSQPTEHGSSPPTVPSGDINTGHTLEPVSHAPVATSPTNLPKNSPVSQPTHGSFPPDLHNGTANNGHTHTPAPKMSFTPPSPFPVDPPLVHPFIPAASPSKSPAPIVSPALTPSRSFSWKKGGEPVSAPVYKTPKPLPGIVHDHTQAPVVSPALTPSRSFNWKKGGEPVSAPPYKIPKPLPAIVHSPAQAPSAPEARQFHYAPEPSPNKDHPPASSPSTTFYKHHHTRNIINSPAPASSYSVSPSTLKHQDEPIPPSLLPASRQRHHAPSPLSTGSTLSPFAFPIQSPISQISPAPSPSFKIPPHSTKIPFHPPEVSPFRPSSQSPKKPVLPRIQALPPPPPNEDCISLVCSDPYTNTPPGAPCKCVWPMKVSLRLSVSLYTFFPLVSEFASEIAIGVFMNQSQVRIMGADAANLQPDKTIVFIDLVPLEEKFDKPTAFLTSERFWHKQVAIKTSYFGDYDVLYVSYPGLPPSPPLPPSSITIVDGGPYSGGGNNSRTIKPLGVDISKRQHKGGLSKGIIAIISLSVFLVVVLCFAAAWALFKFRDHASKLASTPRVLSPSLTKAPGAAGSAVGGRLASASTSFRSSIAAYTGSAKTFSMNDIEKATDNFHDSRVLGEGGFGRVYSGILEDGTKVAVKVLKREDHHGDREFLSEVEMLNRLHHRNLVKLIGICTEVSFRCLVYELIPNGSVESHLHGVDKENSPLDWSARIKIALGSARGLAYLHEDSSPHVIHRDFKSSNILLEEDFTPKVSDFGLARTAADEENRHVSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSRSPGQENLVAWARPLLSSEEGVKAIIDPSLGPDVPSDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAREAGSSSTSVDLSHSRQVSDNFQGQSSATNYDSGVDIENGLLASELFSSSSARYGKRVSGSFRRHSYSGPLNTGRSKRLWQIIRKFSGGSVSEHGTMFKL* | 1282 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu9g2399 | 1281 | CDD | STKc_IRAK | 904 | 1172 | - | - | |
Pvu9g2399 | 1281 | Gene3D | Phosphorylase Kinase; domain 1 | 870 | 973 | - | - | |
Pvu9g2399 | 1281 | MobiDBLite | consensus disorder prediction | 245 | 263 | - | - | |
Pvu9g2399 | 1281 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 456 | 1281 | - | - | |
Pvu9g2399 | 1281 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1020 | 1032 | IPR008271 | GO:0004672|GO:0006468 | |
Pvu9g2399 | 1281 | Gene3D | Transferase(Phosphotransferase) domain 1 | 974 | 1197 | - | - | |
Pvu9g2399 | 1281 | MobiDBLite | consensus disorder prediction | 437 | 565 | - | - | |
Pvu9g2399 | 1281 | MobiDBLite | consensus disorder prediction | 177 | 191 | - | - | |
Pvu9g2399 | 1281 | Pfam | Protein tyrosine and serine/threonine kinase | 901 | 1171 | IPR001245 | GO:0004672|GO:0006468 | |
Pvu9g2399 | 1281 | SUPERFAMILY | Protein kinase-like (PK-like) | 878 | 1171 | IPR011009 | - | |
Pvu9g2399 | 1281 | MobiDBLite | consensus disorder prediction | 319 | 362 | - | - | |
Pvu9g2399 | 1281 | MobiDBLite | consensus disorder prediction | 291 | 311 | - | - | |
Pvu9g2399 | 1281 | MobiDBLite | consensus disorder prediction | 55 | 82 | - | - | |
Pvu9g2399 | 1281 | MobiDBLite | consensus disorder prediction | 129 | 176 | - | - | |
Pvu9g2399 | 1281 | ProSiteProfiles | Protein kinase domain profile. | 898 | 1174 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu9g2399 | 1281 | MobiDBLite | consensus disorder prediction | 384 | 412 | - | - | |
Pvu9g2399 | 1281 | MobiDBLite | consensus disorder prediction | 52 | 87 | - | - | |
Pvu9g2399 | 1281 | ProSitePatterns | Protein kinases ATP-binding region signature. | 904 | 926 | IPR017441 | GO:0005524 | |
Pvu9g2399 | 1281 | MobiDBLite | consensus disorder prediction | 1186 | 1210 | - | - | |
Pvu9g2399 | 1281 | MobiDBLite | consensus disorder prediction | 99 | 371 | - | - | |
Pvu9g2399 | 1281 | PANTHER | OS01G0750732 PROTEIN | 456 | 1281 | - | - | |
Pvu9g2399 | 1281 | MobiDBLite | consensus disorder prediction | 501 | 538 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu9g2399 | Pvu-Chr9 | 34266522 | 34277495 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu9g2399 | 376 | 1277 | Receptor kinase-like Gene Family | AT5G56890 | 55.792 | 0.0 | 876 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_Extensin | Pvu9g2399 | PK_Tyr_Ser-Thr | 1.1e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu9g2399 | - | - | gmx:100802309 | 2028.83 |