Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2386 ATGGAACCTCGCGTTGGGAATAAGTTTAGGCTTGGCCGTAAGATCGGCAGCGGATCGTTTGGAGAGATCTATTTAGGTACTAACATTCAAAATAACGAAGAGGTTGCGGTTAAGCTTGAAAATGTCAAGACAAAGCATCCTCAGTTGCTATATGAATCCAAGTTGTACAGAGTTCTCCAGGGAGGAACTGGAATTCCAGATGTTAGATGGTTTGGAGTGGAGGGAGATTACAATGTTCTAGTGATGGATCTGCTTGGACCTAGCCTTGAAGATCTATTTAACTTCTGCAGTAGAAAGCTCTCACTAAAGACAGTTCTCATGCTTGCTGATCAAATGATCAACCGTGTTGAGTTTGTTCATTGTAAATCTTTTCTACATCGGGATATCAAACCAGATAATTTCCTTATGGGATTGGGAAGGCGGGCAAACCAGGTTTACTGTATTGATTTTGGTTTGGCAAAGAAATATAGGGATAGTTCAACCCATCAACACATTCCATACAGAGAAAATAAGAATTTAACTGGGACTGCTAGATATGCAAGTATGAATACCCACCTTGGCATTGAGCAGAGTCGAAGAGATGATTTGGAGTCTCTAGGTTATGTTTTGATGTATTTCCTGAGGGGAAGTCTCCCTTGGCAAGGACTTAAAGCGGGAACCAAGAAACAGAAATACGAGAGAATCAGTGAAAAAAAGGTTTCTACTTCTATTGAGGCATTGTGTCGAGGTTATCCAACAGAGTTTGCATCATACTTCCATTATTGTCGTTCATTAAGGTTTGATGATAGGCCAGATTATGCTTACCTCAAGAGAATATTTCGTGACCTGTTTATTCGTGAAGGATTCCAATTTGATTATGTGTTTGATTGGACAATCTTGAAGTATCAGCAATCACAGCTAGCCGCGCCTCCTGCACGGGCTCTTGGTCCTACTGCTGGAACTAGTTCTGCAATGCCACCAGCTGTGACTAATGCGGATAGACAAACAGGAGAGGAAGAAGGACGACCTCCAGGTCTGATTTCAGGGGATTCCACAAGGAGAAGAATGTCAGGGACCGTCCCAAACTCTGTAAATATTTCAAGACAGAAAAATCCAGTCACCACGGATGCTGCGTTTAATAAGGAAGCCATGTTATCAAAGCCTAATGTCTTGGGTCAGTCAAGTGGATCAAGGCGAGGTGCTGTTTCTAGTAGCCGCGATGCATTTGCTGGTAGTGATTTGGATTCTCGTACTCGTACTTCTGAGGCTAACCCTGGAACAGTGCGCAAAATATCATCTGGGAGAAATGCATCTTATGTCAGGAACTACGAAAGTGCTGTCAAGGGCATTGAAGGTTTGCAATTGGAAAATGACAAGAGGGCACATTATTAA 1371 0.4252 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQNNEEVAVKLENVKTKHPQLLYESKLYRVLQGGTGIPDVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHCKSFLHRDIKPDNFLMGLGRRANQVYCIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYERISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDRPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLAAPPARALGPTAGTSSAMPPAVTNADRQTGEEEGRPPGLISGDSTRRRMSGTVPNSVNISRQKNPVTTDAAFNKEAMLSKPNVLGQSSGSRRGAVSSSRDAFAGSDLDSRTRTSEANPGTVRKISSGRNASYVRNYESAVKGIEGLQLENDKRAHY* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2386 456 MobiDBLite consensus disorder prediction 402 430 - -
Pvu9g2386 456 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2386 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pvu9g2386 456 MobiDBLite consensus disorder prediction 381 395 - -
Pvu9g2386 456 MobiDBLite consensus disorder prediction 381 430 - -
Pvu9g2386 456 MobiDBLite consensus disorder prediction 305 366 - -
Pvu9g2386 456 Gene3D Transferase(Phosphotransferase) domain 1 1 317 - -
Pvu9g2386 456 Pfam Protein kinase domain 10 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2386 456 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pvu9g2386 456 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2386 456 MobiDBLite consensus disorder prediction 345 366 - -
Pvu9g2386 456 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Pvu9g2386 456 PANTHER CASEIN KINASE-RELATED 1 437 - -
Pvu9g2386 456 PANTHER CASEIN KINASE I-LIKE 1 437 - -
Pvu9g2386 456 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2386 Pvu-Chr9 34070398 34078512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2386 7 223 EF-hand Containing Proteins AT2G17890 25.333 3.28e-12 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pvu9g2386 Pkinase 1.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2386 K02218 - gmx:100786777 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2386 9 34070398 34078512 Pvu9g2386 9 34070398 34078512 ECH
Pvu3g1400 3 32637271 32643313 Pvu9g2386 9 34070398 34078512 PCT