Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2376 ATGGAGGAAATAACTTCGACGGTTGCAGTGCCATTTGCACTTGGGAATTTGATACAAAAAGATCCATCAGTGACAACCCACATGGAGATAACTGGCCTAAAGCTCAGGGCAAATACTGCACCAGTTTTAATATTAAATCCTGCAATGGAAAGGGAAAATCACACAGATATTGGTCCTCAACCCCAAAATAAAGTGTCTTCAGAGGCAAAGGACAACCAGGTTGGAGCTGATTTTGTCTCAGAAATGGTAAGTCAAGGAGACAATAATTGTTTTCATGCTGAAAACCAAAAGCAGGCAAGGAAAGAAAATCAATCATTGTTAGCTAAGGATTTTCAGTGTGAGCATATCTCTCAATCTGCTGCTGGTGACAAAAGTAGTCCTTGTAACGAGGAATCTTCTGTTTCTAGAGCTAATTGTTGTGAAATAAGTTCACCTATCACCATAAAGGTTGATGATAACACAATTCATGGAAGGGCCGGTTCGACCGAGCCGCCAGGTGCAGCTATAGAGCCACTGCAGAACATGGTTTCTGTTGCTAGGGGACAGGAGAGTGAAGATGGAAGTGGATCAGATGAGTCTGATAAAAAACCATTTGACGTGGTTCATGAGATGCCAGAGAAGGCAACATGCTTGGAATTGAGTGTTGCTACCAGTACTACCCCACTTTGGGGTTGCTCATCAGTTTGTGGAAGGAGAGAGGAAATGGAAGATGCTATTGCTGTTAGGCCTCACCTTTTTCAAGTCACTTCAATGATGGTAATGGATGATTATGTGAGTGAAAACTCAAAATTTTCACCAGCCCACTTTTTTGGTGTGTATGATGGACATGGGGGCTGTCAGGTTGCCAATTACTGCCGGGAACATCTTCATTCAGTGTTGGTTGATGAGATAAAAGCTGCACAATCGAGTTTGGAAGAACAGAATGGGAGGGAAAACTGGGAGGACCAATGGAAGAAGGCATTCTCCAATTGCTTTCACAAAGTAGATGATGAGGTTGGAGGAGTTGGTGAAGATAATGGAGCAAGTGTTGAACCTCTTGCTTCTGAGGCTGTTGGCTCCACTGCTGTGGTTGCCCTTTTGACTCAAACTCACATAATAGTTGCAAACTGTGGAGATTCAAGAGCTGTCTTGTGTCGTGGAAAAGAAGCAATACCAATGTCTGATGATCACAAACCAAATAGAGAAGATGAATGGGAAAGGATTGAAGCTTCAGGAGGAAGGGTCATACAATGGAACGGGTACCGAGTTCTTGGTGTTTTGGCAGTGTCAAGGTCCATAGGTGACAGGTACTTGAAACCATGGGTAATTCCAGAGCCAGAAGTGAAGTGTGTCCAAAGAGACAAAAACGATGAGTTCCTCGTTCTGGCCAGTGATGGATTATGGGATGTCATGACAAATGAAGAAGCCTGTGACTTTGCAAGAAGGAGAATCCTTCTTTGGCATAAGAAGAATGGCAACAACTCTTCATCACAACAAGGCCAAGGACCTGACCCTGCAGCTCAGTATGCTGCAGAGTATCTATCTAGACTTGCCCTTCAAAGAGGAAGCAAAGATAACATCTCTGTCATTGTTATAGACTTGAAGCCCCAAAGAAAATTCAAGAAAAAAGAATAA 1614 0.4312 MEEITSTVAVPFALGNLIQKDPSVTTHMEITGLKLRANTAPVLILNPAMERENHTDIGPQPQNKVSSEAKDNQVGADFVSEMVSQGDNNCFHAENQKQARKENQSLLAKDFQCEHISQSAAGDKSSPCNEESSVSRANCCEISSPITIKVDDNTIHGRAGSTEPPGAAIEPLQNMVSVARGQESEDGSGSDESDKKPFDVVHEMPEKATCLELSVATSTTPLWGCSSVCGRREEMEDAIAVRPHLFQVTSMMVMDDYVSENSKFSPAHFFGVYDGHGGCQVANYCREHLHSVLVDEIKAAQSSLEEQNGRENWEDQWKKAFSNCFHKVDDEVGGVGEDNGASVEPLASEAVGSTAVVALLTQTHIIVANCGDSRAVLCRGKEAIPMSDDHKPNREDEWERIEASGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWVIPEPEVKCVQRDKNDEFLVLASDGLWDVMTNEEACDFARRRILLWHKKNGNNSSSQQGQGPDPAAQYAAEYLSRLALQRGSKDNISVIVIDLKPQRKFKKKE* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2376 537 CDD PP2Cc 224 527 IPR001932 -
Pvu9g2376 537 ProSiteProfiles PPM-type phosphatase domain profile. 222 527 IPR001932 -
Pvu9g2376 537 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 113 537 - -
Pvu9g2376 537 PANTHER ALPHABET, ISOFORM E-RELATED 113 537 - -
Pvu9g2376 537 SMART PP2C_4 212 525 IPR001932 -
Pvu9g2376 537 Gene3D - 212 537 IPR036457 -
Pvu9g2376 537 ProSitePatterns PPM-type phosphatase domain signature. 269 277 IPR000222 GO:0043169
Pvu9g2376 537 SUPERFAMILY PP2C-like 220 529 IPR036457 -
Pvu9g2376 537 Pfam Protein phosphatase 2C 226 520 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2376 Pvu-Chr9 33939666 33943447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2376 221 536 PP2C-type Phosphatase Gene Family AT1G17550 58.333 7.02e-134 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2376 K14497 - gmx:100812974 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1390 3 32504650 32508475 Pvu9g2376 9 33939666 33943447 PCT