Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2365 ATGGAAGAAGAGAGTGGCGTGGCAGACAAGAAAGGGACAAAGAACGAGGTTGTTCTGCGAATTTCAGACTCTGAAGAAGCCCAGAATGCAACGAAGGAAATTAAAGATTCCGGAAGTTTCCCAGTAGCTGAAAGCAGTTCCCTTTCTCCTCAGCACAACACCTTCACCCAGATAAGTAAAAGGTTTAGAGATTCTCGTGGTGAAATCACAGAGCCTCTGAGCAACAAGGATCAAGTTTCAACAGAGTTGGAGACAACTTCAAAGAAGTTGATGGGTCGGTCGGAATTTTCGAAGCCAAAGTCCAGAATGGTGGAACCATCGTTTCCAAAATATGCAAAATTTGTTGATGAAAAGGCTCGAGTGACAAGTTCATTTGCAAGGAATTCTCCTAACAGGAATGTTCCGGAAGCAACTATAGTCGCCCCAAGAACCCGCTTTCTTGGGACTCCTGCGGAAGAAGATGATGATGATGATGAAATGTACGAGATTGCAAATATGGCAGTTAGCAAGAGATCTGGAAGAAAGTGGAAAATTGTTGAGTTGTTTGCTTTTGCTTTCATCATGGGGTTTTTTATTGCAAGTTTGACTGTTACTAAGTTGCAAAAAAGAGAGGTTTGGGGTTTGAAGCTGTGGAAATGGTGTGTATTTGTATTGGTTATCCTCTGTGGTAGACTGGTCACTGAGTGGTTCATCAATGTTTTGGTTTTCTTGATTGAGAGGAACTTTTTATTTAAGAAGAAGGTTTTGTATTTTGTTTATGGTGTGAAGAAGAGTGTTCAGGGCTTTATATGGCTGAGTTTGGTTCTTTTGACATGGGAAATGCTTTTCAGCCCTGGAGTGAAGAGAACCAGGAAGGTTGGTAGGATTCTTAATTACATTACTCTGACGCTTGCTTCTTGTCTTATTGGAGCAGCTTTATGGTTAGCCAAAACATTGTTGATAAAGCTTTTAGCTTCAAAATTTCAATCTACTAGATTTTTTGACAGGGTTCAAGAATCAATCTTTCATCAATACATTCTCAAGACTCTTTCAGGCCCTCCCTTGATGGAGGGGGCTGAAAAGGTAGGTTCCACTTCAAATAGTGGCCAACTCAGTTTTAAGACCAAGATTAATAAGAAGGTAGGGGAGAAAGAACAAGTTATTGATGTACACAAGCTCAAGAAAATGAAACATAATAAAGTTTCTGCTTTGACTATGAAAGGGTTGATTAACGTGATAAGGAGTTCTGGGTTGTCTACCATCTCCTATGCACAGGTTGAAAATGAGAATGACCAGAAAGATGATGAAATTAATAGCGAGTGGGAAGCTAAGGCCGCTGCTTATAGAATTTTTGGGAACGTTGCCAAGCCTGGACACAAGTATATTGAGATGGATGACCTCTTGCGATTCATGAAAATTGAACAAGTGGAAAATGTGCTTCCACTATTTGAAGGAGCAGTTGAGACTAGAAGAATTAAGAGGAAGTCTCTCAAGAACTGGCTGTTGAAAGTGTACCTTGGACGCAGATCTCTCATACATTCACTAAATGATACCAACACAGCTGTTGATGACTTGAATATACTTGCTTCTGCAGTTGTGGTTATTGTGATCATCATTGTGTGGCTTCTTCTAACGGGTTTCTTAGACACTAAAGTTCTTGTCTTTATTTCATCCCAGCTTTTACTTGTGGGTTTCATGTTTGGCAACACAGCTAAGACTGTATTTGAAGCTATTATATTTGTTTTCATAGTGCACCCGTTTGATGTTGGTGATCGCTGTGTCATTGATGATGTTCAGATGGTTGTGGAAGAGATGAACATACTAACTACTGTCTTTTTGAGATATGACAATGAAAAGATTTTCTATCCAAATTCAGTTCTGGCAACCAAGCCAATCAGTAACTACAACAGGAGTCCAGAAATGTGTGATTCTGTTGAATTTGCTGTTGATGTTTCTACTTCTATTGAAAGTATTGGAGCTCTAAAGGGAAAGTTAAAAGTATATTTGGAGAGTAGGCCTCAACACTGGCAGACTAAACACAACGTATTGGTTAAGGACATTGAGAATGTAAATAAGATGAAAATGGTTGTGAATGTTACTCACACCATAAATTTTCAGAACTATGGGGATAAGAACAGCAGAAGATCCGAATTAGTTCTGGAGTTAAAGAAAATTCTTGAAGAGCTTAATATTAAATATCATATGCTGACACAAGAAGTTCATCTTGTCAGTTATGTAAGGCCACAAAACTCAACATGGCCAACACTTTGA 2250 0.3907 MEEESGVADKKGTKNEVVLRISDSEEAQNATKEIKDSGSFPVAESSSLSPQHNTFTQISKRFRDSRGEITEPLSNKDQVSTELETTSKKLMGRSEFSKPKSRMVEPSFPKYAKFVDEKARVTSSFARNSPNRNVPEATIVAPRTRFLGTPAEEDDDDDEMYEIANMAVSKRSGRKWKIVELFAFAFIMGFFIASLTVTKLQKREVWGLKLWKWCVFVLVILCGRLVTEWFINVLVFLIERNFLFKKKVLYFVYGVKKSVQGFIWLSLVLLTWEMLFSPGVKRTRKVGRILNYITLTLASCLIGAALWLAKTLLIKLLASKFQSTRFFDRVQESIFHQYILKTLSGPPLMEGAEKVGSTSNSGQLSFKTKINKKVGEKEQVIDVHKLKKMKHNKVSALTMKGLINVIRSSGLSTISYAQVENENDQKDDEINSEWEAKAAAYRIFGNVAKPGHKYIEMDDLLRFMKIEQVENVLPLFEGAVETRRIKRKSLKNWLLKVYLGRRSLIHSLNDTNTAVDDLNILASAVVVIVIIIVWLLLTGFLDTKVLVFISSQLLLVGFMFGNTAKTVFEAIIFVFIVHPFDVGDRCVIDDVQMVVEEMNILTTVFLRYDNEKIFYPNSVLATKPISNYNRSPEMCDSVEFAVDVSTSIESIGALKGKLKVYLESRPQHWQTKHNVLVKDIENVNKMKMVVNVTHTINFQNYGDKNSRRSELVLELKKILEELNIKYHMLTQEVHLVSYVRPQNSTWPTL* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2365 749 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 10 737 IPR016688 -
Pvu9g2365 749 Pfam Mechanosensitive ion channel 523 725 IPR006685 GO:0016020|GO:0055085
Pvu9g2365 749 SUPERFAMILY Sm-like ribonucleoproteins 569 628 IPR010920 -
Pvu9g2365 749 MobiDBLite consensus disorder prediction 1 32 - -
Pvu9g2365 749 MobiDBLite consensus disorder prediction 40 58 - -
Pvu9g2365 749 MobiDBLite consensus disorder prediction 1 80 - -
Pvu9g2365 749 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 10 737 - -
Pvu9g2365 749 Coils Coil 712 732 - -
Pvu9g2365 749 PIRSF Memb_At2g17000 1 747 IPR016688 -
Pvu9g2365 749 Gene3D - 579 628 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2365 Pvu-Chr9 33783140 33786556 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2365 25 735 Mechanosensitive Ion Channel Family AT5G12080 48.148 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2365 K22048 - gmx:100777332 1058.9