Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2364 ATGGAAGAAGAAAGAGACGTGGCAGACAAGAAAATGACAAAGAACGAGGTGGTTCTACGAATTTCAGACACTGAAGAAGCCATGAATGCAGAGAAGGAGCAAAGAGATTCTAGAACTTTCCCAGTAGCTAAAAACAGTTCCCTTTCAACTCAGCATAATACCCAGATAGGTAAAGGGTTTAGAGATTCTCATGGTGAAGTCACAGAGCTCAATGGTCAAGTATCCACAGAGTTGGTGACAACTACAAAGAAGTTGATGGGTCGGTCGGAGTTTTCAAAGCCAAAGTCCAGAATGGTGGAGCCAACGTGTCCAAAAGATGCAAGCTTTGTCGAAGAAAAGGCTCAACTGACAAGTTCACCTGCAAGGAGTTCTCCTAACAAGAATGTTCCTGACGCAACTATTGTCACCCCAAGAAGCCCCTTGCATGGGACACCAGGGGAAGAAGAAGATGATGACGAAGAAGTGTACAAGACTGCATATATTGAAGTGAGCAAGAGATCTGGTAACAAGTGGAGAGCTTTTGAGTTGTTTACTTTTGCTTGCATTGTGGGGTTTTTTATTGCAAGCTTGACTGTGAATGAGTTGCAAAAAAGGTTGATTTGGGGATTGGAACTGTGGAAATGGTGTGTATTGGTTTTGGTTATCCTCTGTGGTAGACTGGTCACTGAGTGGTTCATCAATGTCTTGGTTTTCTTGATTGAGAGAAACTTTTTATTTAAGAAGAAGGTTTTGTATTTTGTTTATGGTGTGAAGAAGAGTGTTCAGGGATTTATATGGCTAAGTTTGGTTCTTTTAACATGGGGACTGCTTTTCAACCATGGTGTGGAGAGAACCAGAAAGGTTACTAAGATTCTTAATTACATTACTAGGGCTCTTGCTTCTTGTCTTATTGGAGCAGCTATATGGTTGGTCAAAATATTGTTGATAAAACTTTTAGCTTCAAAATTTCAATCTACTAGATTTTTTGATAGAGTGCAACAATCAATCTTTCATCAATACATTCTCAAGACTCTTTCAGGTCCTCCCTTGATGGAGGTTGCTGAAAATGTAGGTTGGGCTTCACATAGTGGCCAACTCTGTTTTAAGACCATGAATAATGAGAATGAAAGGGAGAAAGAACAACTCATTGATGTAGACAAGCTCAAGAAAATGAAACAAGAGAAAGTTTCTGCTTGGACTATGAAAGGGTTGATTAATGTGATAAGGAGTTCTGGGTTGTCTACCATCTCCTATGCACAGGATGAAAATGAGAATGACCAGAAAGATAATGAAATTAATAGCGAGTGGGAAGCAAAGGCAGCTGCATACAGAATTTTTGGGAACGTAGCCAAGCCAGGACACAAGTATATTGAGAAGGATGACCTCTTGCTGTTCATGAAAAATGAAGAAGTAGAAAACGTGCTTCCACTATTTGAAGGGGCAGTTGAGACTAGAAGAATTAAGAGGAAGTCTCTCAAGAACTGGCTGGTAAAAGTTTACCTTGAACGCAGATCGCTCCTACATTCACTAAATGATACCAACACAGCTGTTGATGACTTGAATATGCTTGCTTCTTTGGTTGTGCTTATTGTGATCATTATTGTGTGGCTTCTTATAATGGGTTTCTTAACAACCGAAGTTCTTGTCTTTATTTCATCCCAGCTTTTACTTGTGGTTTTCATGTTTGGCAACACAGCTAAGACTGTATTTGAAGCCATTATATTTATTTTTGTGATGCACCCCTTTGATGTTGGTGATCGCTGTGTTATTGATGGAGTTCAGATGGTTGTGGAAGAGATGAGCATACTAACTACCGTCTTTCTGAGATATGACAATGAAAAGATTTTCTATCCAAATTCAGTTCTAGCAACCAAGCCAATCAGTAACTTCTACAGGAGTCCAGAAATGACTGATTCTGTTGAATTTGCTGTTGATGTTTCTACTTCTATTGAAAGTATTGGAATTTTAAATGAAAAGTTAAAAGTATGTTTGGAGAGTAGACCTCAGCATTGGCGTCCCAACCACAGCGTATTGGTTAAGGATATTGAGAATGTAAATAAGATGAATATGGCTCTATATGTCACTCACACCATAAATTTTCAGAATTATGGTGATAAGAGCAGAAGAAGATCCGAATTAGTCCTAGAGTTAAAGAAAATTCTTGAAGATCTTAATATTAAATATCATCTGCTGCCACAAGAAGTTCATCTCAGTTATGTAAGCTCACAAGACTCAACAGCACAGACATTTTGA 2232 0.3871 MEEERDVADKKMTKNEVVLRISDTEEAMNAEKEQRDSRTFPVAKNSSLSTQHNTQIGKGFRDSHGEVTELNGQVSTELVTTTKKLMGRSEFSKPKSRMVEPTCPKDASFVEEKAQLTSSPARSSPNKNVPDATIVTPRSPLHGTPGEEEDDDEEVYKTAYIEVSKRSGNKWRAFELFTFACIVGFFIASLTVNELQKRLIWGLELWKWCVLVLVILCGRLVTEWFINVLVFLIERNFLFKKKVLYFVYGVKKSVQGFIWLSLVLLTWGLLFNHGVERTRKVTKILNYITRALASCLIGAAIWLVKILLIKLLASKFQSTRFFDRVQQSIFHQYILKTLSGPPLMEVAENVGWASHSGQLCFKTMNNENEREKEQLIDVDKLKKMKQEKVSAWTMKGLINVIRSSGLSTISYAQDENENDQKDNEINSEWEAKAAAYRIFGNVAKPGHKYIEKDDLLLFMKNEEVENVLPLFEGAVETRRIKRKSLKNWLVKVYLERRSLLHSLNDTNTAVDDLNMLASLVVLIVIIIVWLLIMGFLTTEVLVFISSQLLLVVFMFGNTAKTVFEAIIFIFVMHPFDVGDRCVIDGVQMVVEEMSILTTVFLRYDNEKIFYPNSVLATKPISNFYRSPEMTDSVEFAVDVSTSIESIGILNEKLKVCLESRPQHWRPNHSVLVKDIENVNKMNMALYVTHTINFQNYGDKSRRRSELVLELKKILEDLNIKYHLLPQEVHLSYVSSQDSTAQTF* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2364 743 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 10 735 IPR016688 -
Pvu9g2364 743 PIRSF Memb_At2g17000 1 742 IPR016688 -
Pvu9g2364 743 MobiDBLite consensus disorder prediction 112 133 - -
Pvu9g2364 743 MobiDBLite consensus disorder prediction 40 58 - -
Pvu9g2364 743 MobiDBLite consensus disorder prediction 27 74 - -
Pvu9g2364 743 SUPERFAMILY Sm-like ribonucleoproteins 564 623 IPR010920 -
Pvu9g2364 743 MobiDBLite consensus disorder prediction 112 152 - -
Pvu9g2364 743 Gene3D - 574 623 IPR023408 -
Pvu9g2364 743 Pfam Mechanosensitive ion channel 516 720 IPR006685 GO:0016020|GO:0055085
Pvu9g2364 743 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 10 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2364 Pvu-Chr9 33778813 33781841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2364 81 731 Mechanosensitive Ion Channel Family AT5G12080 52.941 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2364 K22048 - gmx:100777332 1165.21