Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2359 ATGGAAAGCAAGAACTGTTGTGAAAAAGAAGGAGCATGGTCTTCTGAAGAAGACCAGATTCTCTTCAACTGTGTTCAACTCACTGGAGAAGGAAATTGGAGAGACCTTCCCCAAAGAGCTGGGTTGAAACGATGTGGTGAGAGTTGCAAGCATCGATGGCTGAACTATCTGAAGCCAACCATTTCTATCCCCACAGAGAACTTTTCTTGGGATGAGCAAGAACTCATAATCAGACTGCATAAGCTCTTGGGGAATAGATGGTCTATGATTGCTGGAAGATTACCAGGACGCAGTGAAGATGAGATCAAGAACTTCTGGAATACTCATTTGAGCAAGAAGGAGTTAGAAGAGAAGCAGGAAAAGAAGAATAAAGTTCCAAGCACAAGTGTGGCAACTACTAGCATGTCCAGTGTTCAATCTCCATGGTGCTCCCAAAACCACCTTAATATGAATTCCATGGAATCTCCAAACCATGTCATAGTTAGACCTAAAGTTGTTAGGTTAACTAAGGTTGTGGTGCCAAGACAGGTACCCAATGGAAAATGCAATCAATTTGCCTCTGCATCAATTTCATAA 576 0.4219 MESKNCCEKEGAWSSEEDQILFNCVQLTGEGNWRDLPQRAGLKRCGESCKHRWLNYLKPTISIPTENFSWDEQELIIRLHKLLGNRWSMIAGRLPGRSEDEIKNFWNTHLSKKELEEKQEKKNKVPSTSVATTSMSSVQSPWCSQNHLNMNSMESPNHVIVRPKVVRLTKVVVPRQVPNGKCNQFASASIS* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2359 191 SMART sant 64 112 IPR001005 -
Pvu9g2359 191 SMART sant 9 59 IPR001005 -
Pvu9g2359 191 Gene3D - 67 128 - -
Pvu9g2359 191 CDD SANT 12 57 IPR001005 -
Pvu9g2359 191 ProSiteProfiles Myb-like domain profile. 9 57 IPR001005 -
Pvu9g2359 191 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 4 172 - -
Pvu9g2359 191 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 4 172 - -
Pvu9g2359 191 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 114 IPR017930 -
Pvu9g2359 191 CDD SANT 67 110 IPR001005 -
Pvu9g2359 191 Gene3D - 10 62 - -
Pvu9g2359 191 MobiDBLite consensus disorder prediction 115 137 - -
Pvu9g2359 191 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 59 IPR017930 -
Pvu9g2359 191 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Pvu9g2359 191 Pfam Myb-like DNA-binding domain 11 57 IPR001005 -
Pvu9g2359 191 ProSiteProfiles Myb-like domain profile. 67 110 IPR001005 -
Pvu9g2359 191 SUPERFAMILY Homeodomain-like 10 106 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2359 Pvu-Chr9 33726547 33729388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2359 6 169 MYB Transcription Factor Family AT4G21440 44.886 2.50e-45 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu9g2359 Myb_DNA-binding 2.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2359 K09422 - gmx:778159 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2359 9 33726547 33729388 Pvu3g1369 3 32237134 32238888 PCT