Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2357 ATGATGAATGGAAGGAACAGGTTTCCCTTCACCCCTTCACAGTGGCAAGAGCTTGAACATCAAGCTCTAATCTACAAGTACATGGCTTCAGGAATTTCCATTCCGCCTGATCTTCTCTTCACAATAAAAAGGAGCTACTTTGATTCCCCTCTGTCCTCAAGGCTTTTGCCTAACCAGCCACAGCACTTTGGATGGAACTACCTGCAGATGGGTTTGGGGAGAAAAATAGACCCTGAGCCTGGTAGGTGTAGAAGAACTGATGGCAAGAAATGGAGATGCTCCAAAGAGGCATACCCAGATTCAAAGTACTGTGAGAGGCACATGCACAGAGGGAAAAATCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACACCAACAACAAACACAAATGCTTCAACTCAACAACCAATCTCATCAATCACCAAACTTAATACTGTCAATACTCTTTCTCCTCTTGCATCATCTGAAACACACCAACACCACCCTCCACACTATGCCTCCTTTCTCTATCAGCACCCTCCATCAAGGTCCTCTGGCATTGGCTTGTCCTTTGAAGACAACAGTGCTCCCTTGTTTCTTGACACTGGCTCTTGCTCTCAGTCCAACACAGATTGCAGGAGTAGGTATGCTTACGGAGAGAAAGAAGAGGTTGATGAGCATGCTTTCTTCACAGAGCCATGTGGTATCATGAAAAGCTTTTCTGCTTCCTCTATGGATGATTCTTGGCAACTCACACCATTGACTATGAGCTCCTCCTCTTCTTCCAACAAACAGAGGAGTTCCTTTGGCTTGTCCAATGATTATTCTTGCTTGCAACTTCAGAGCCACTCAAAGCAGCAAGAGCAACAAGATCAGGGTGGTTGCTACATGCTAGGTGGAGGAGGCCATCTTGGAAAAGAAGAACCTCAGAAAACCGTTCACCGCTTCTTTGATGAATGGCCCCACAAAGGAAGACAAGGATCTTGGCTAGATTTGGATGACAAATCTTCCACAACACAACTTTCAATTTCCATTCCCACCTCTTCTCATGATTTTCCAGCCTTCAGTTCCAGAACCCACCGTGATGGTTGA 1074 0.4525 MMNGRNRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIKRSYFDSPLSSRLLPNQPQHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTPTTNTNASTQQPISSITKLNTVNTLSPLASSETHQHHPPHYASFLYQHPPSRSSGIGLSFEDNSAPLFLDTGSCSQSNTDCRSRYAYGEKEEVDEHAFFTEPCGIMKSFSASSMDDSWQLTPLTMSSSSSSNKQRSSFGLSNDYSCLQLQSHSKQQEQQDQGGCYMLGGGGHLGKEEPQKTVHRFFDEWPHKGRQGSWLDLDDKSSTTQLSISIPTSSHDFPAFSSRTHRDG* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2357 357 MobiDBLite consensus disorder prediction 334 348 - -
Pvu9g2357 357 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pvu9g2357 357 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Pvu9g2357 357 MobiDBLite consensus disorder prediction 334 357 - -
Pvu9g2357 357 PANTHER - 2 344 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pvu9g2357 357 Pfam WRC 78 120 IPR014977 -
Pvu9g2357 357 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pvu9g2357 357 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pvu9g2357 357 MobiDBLite consensus disorder prediction 276 297 - -
Pvu9g2357 357 PANTHER GROWTH-REGULATING FACTOR 6 2 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2357 Pvu-Chr9 33698851 33700993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2357 7 120 GRF Transcription Factor Family AT3G13960 71.053 2.62e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pvu9g2357 WRC 7.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2357 - - gmx:100814271 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2357 9 33698851 33700993 Pvu9g2357 9 33698851 33700993 ECH
Pvu3g1366 3 32178603 32181228 Pvu9g2357 9 33698851 33700993 PCT