Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2347 ATGACCCTCATGAAAATGATATGGAAATCCATCTTCCCCGGTTGTTACAAGGGTGAGTATCCCTCTCCGAAGCCAAAGAAAGTGGTGGCTACAAAGCCAAATTCTTCTCACAGGATTTCTGTGACGGATTTGAGTTATCCAACCACCACTCTTTCAGAGGATCTCTCCATTTCTCTAGCGGGGACTAACCTCCATGTTTTCTCACTTGCTGAGCTCAAGATCATCACGCAGTCTTTCTCTTCTAGCAACTTTCTAGGAGAAGGTGGGTTCGGACCAGTGCATAAAGGCTTCATTGATGACAAGCTCAGGCATGGCCTTAAGGCCCAACCCGTGGCTGTTAAGCTCTTGGACTTGGATGGCTCGCAGGGCCACAAAGAGTGGTTGACTGAAGTTGTTTTTCTGGGTCAACTAAGGCATCCACATCTGGTGAAGCTGATAGGATACTGTTGTGAAGAAGAACACAGACTTTTGGTATATGAATATTTACCAAGAGGCAGCTTGGAGAATCAATTATTTAGAAGATTCACAGCATCACTGGCATGGTCAACGAGAATGAAAATTGCTGTTGGGGCTGCCAAGGGTCTAGCCTTTCTTCATGAAGCCGAGAAGCCGGTCATTTATAGAGATTTCAAAGCTTCCAACATCTTGTTAGACTCTGATTACAATGCAAAGCTATCTGATTTTGGGTTGGCAAAAGACGGTCCCGAAGGAGATGACACCCACGTTTCAACCCGAGTAATGGGCACACATGGATACGCAGCACCAGAATATGTGATGACAG 781 0.4571 MTLMKMIWKSIFPGCYKGEYPSPKPKKVVATKPNSSHRISVTDLSYPTTTLSEDLSISLAGTNLHVFSLAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKLRHGLKAQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRFTASLAWSTRMKIAVGAAKGLAFLHEAEKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTHGYAAPEYVMT 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2347 260 SUPERFAMILY Protein kinase-like (PK-like) 46 259 IPR011009 -
Pvu9g2347 260 ProSiteProfiles Protein kinase domain profile. 79 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g2347 260 PANTHER OS01G0588500 PROTEIN-RELATED 22 260 - -
Pvu9g2347 260 Gene3D Phosphorylase Kinase; domain 1 43 161 - -
Pvu9g2347 260 Gene3D Transferase(Phosphotransferase) domain 1 162 260 - -
Pvu9g2347 260 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 22 260 - -
Pvu9g2347 260 Pfam Protein tyrosine and serine/threonine kinase 83 258 IPR001245 GO:0004672|GO:0006468
Pvu9g2347 260 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2347 Pvu-Chr9 33585922 33587703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2347 65 260 Glycoside Hydrolase AT3G07070 55.276 2.29e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu9g2347 PK_Tyr_Ser-Thr 9.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2347 - - gmx:100783759 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1352 3 31974081 31976785 Pvu9g2347 9 33585922 33587703 PCT