Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2341 ATGCAGAAGAAGTCGACATTGCCACTGAGCGACGCGAATGCGAACAGGAAGAAGAAGGAACTGCGCAGCAAGGAAACGTTGGTGAAGCTTCTAAGATGGCATTTTGGGTACCCTGATTTTAGGGGCATGCAATTGGACGCTATTCAGTCGGTGCTCTCAGGAAAGGATTGTTTTTGCCTTATGCCAACTGGGGGAGGCAAGTCAATGTGTTATCAGATCCCTGCATTGGCAAAAACAGGAATTGTGCTTGTTGTATCTCCTTTAATAGCCTTAATGGAAAACCAAGTAATGGCACTGAAGGAGAAAGGGATTGCAGCAGATTTTCTCTCCTCAACAAAAACCGCGGATGCTAAAGTAAAGATTCACGAGGACCTTGATTCTGGAAAACCTTCTACAAGGCTGCTATATGTGACTCCAGAGTTGATAGCAACACCAGGGTTTATGTCAAAGCTGACCAAGATTTATACTAGGGGTCTGCTAACTCTCATTGCCATAGATGAGGCGCATTGCATCTCAAGTTGGGGTCATGATTTCAGACCTAGCTACCGTAAGCTTTCATCTTTGAGAAGCCACCTACCAGATGTACCAATATTAGCTTTGACTGCTACTGCTGCGCCAAAGGTTCAGAGGGATGTAGTTGAATCCTTGCGGATGCAAAATCCATTAGTACTCAAGTCTTCATTTAATCGTCCAAATATATATTATGAAGTTAGATACAAAGATCTATTGGATGATGCTTTTGCTGATTTATCTAATACACTCAAATCTCTGGGAGATGTCTGTGCAATAGTGTACTGCCTTGAACGTTCAATGTGTGATGACTTGTCAAGTAATCTATCCCAAAGTGGCATTTCATGTGCTGCTTATCATGCAGGATTGAATAATAAAATGCGAACTTCGGTATTAGATGATTGGATTTCTTCTAAGATAAAAGTTGTTGTTGCCACTGTTGCTTTTGGAATGGGCATTGATAGAAAGGATGTCAGAATTGTGTGCCATTTCAATATTCCCAAGTCAATGGAAGCATTCTATCAAGAGTCTGGCAGAGCTGGTCGTGATCAATTGCCATCTAGAAGTTTGTTGTACTATGGGGTAGATGATTGCAAAAGAATGAAATTTATATTAAGTAAATCGGGGAGCAAGAACTCACAGTCATCTAGTTCACAAGAAGAATCATCCAAAATATCCCTTACTGCTTTCAATCAGATGGTTGAATACTGTGAAGGATCTGGATGCCGCAGGAAAAGGATTCTTGAGAGTTTTGGGGAACAGGTAACTGCATCACTATGTGGAAAAACATGTGATGCCTGCAGACATGCAAACTTAGTTGCCAGATGTTTGGAGGATCTCAAAACTGTTTCTGCTCTATGCCATAAAAATGGTTCTTCTCGAGTTTTTATAACCAGTTCCACCAGCGCAATCGATGGAGAACAGTTATCTGAATTCTGGAATCGGGGAGGGGAAGCAAGTGGATCAGAGGAAGATATATCTGATTCAGAAGATGGTAATGAGGTTATCAACAACCTAACCAGGTCAAAGCTTCAATCCAGATTGGGAGTAAATGAAAAGCTTGCGATGTTACAACGGGCAGAAGAAAACTTCTATAAAAATAATAACAGTTATAAACAGAGCAACAAAGTTGACAAGAATGCTATTTCTGATCCAATGCGAGGAGCAAGCAGGCAAAGGTTGCAAAATGCTCTAAAACAGGTTCAGCAACGGCTTGACAACTTCAAGATTGAAGTGGATACGTCAGCATCTTTCCTTGAAGATGAATGCTACAAGAAATATGGCAAGGCAGGCAAATCATTCTATTATTCGCAAGTGGCAAGTACTGTAAGATGGCTGAAGTCTGCTAGCTCCAGCGAATTGATGAACCGACTTCGTTCAATTAATGCTTCTGCCTCAATGAGTGTCGTGTCCGAAGCTAAACAGTCCCTTTCACCAGCTGAACAGCCCTTCAAATCGCCACCTGCTTTAGATCCTTGTGCCGAAGATACCAGCAATGAATACTCTGGCAATGCTAGATCAGAAACTTCTCCATGTATTGTGCCAATGGAAAGCTGTTCGTTTAATAATACCAACTTGCCACAAATACCATCCTTCTCTGAATTCGTAAATAGTAGGAAAACAAAAGGGGACCAGTTAAATGACACAAAGAAGCATTCAAGAGTCGAAAAGAAGATGAGGATGCAGTAA 2199 0.4138 MQKKSTLPLSDANANRKKKELRSKETLVKLLRWHFGYPDFRGMQLDAIQSVLSGKDCFCLMPTGGGKSMCYQIPALAKTGIVLVVSPLIALMENQVMALKEKGIAADFLSSTKTADAKVKIHEDLDSGKPSTRLLYVTPELIATPGFMSKLTKIYTRGLLTLIAIDEAHCISSWGHDFRPSYRKLSSLRSHLPDVPILALTATAAPKVQRDVVESLRMQNPLVLKSSFNRPNIYYEVRYKDLLDDAFADLSNTLKSLGDVCAIVYCLERSMCDDLSSNLSQSGISCAAYHAGLNNKMRTSVLDDWISSKIKVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGVDDCKRMKFILSKSGSKNSQSSSSQEESSKISLTAFNQMVEYCEGSGCRRKRILESFGEQVTASLCGKTCDACRHANLVARCLEDLKTVSALCHKNGSSRVFITSSTSAIDGEQLSEFWNRGGEASGSEEDISDSEDGNEVINNLTRSKLQSRLGVNEKLAMLQRAEENFYKNNNSYKQSNKVDKNAISDPMRGASRQRLQNALKQVQQRLDNFKIEVDTSASFLEDECYKKYGKAGKSFYYSQVASTVRWLKSASSSELMNRLRSINASASMSVVSEAKQSLSPAEQPFKSPPALDPCAEDTSNEYSGNARSETSPCIVPMESCSFNNTNLPQIPSFSEFVNSRKTKGDQLNDTKKHSRVEKKMRMQ* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2341 732 MobiDBLite consensus disorder prediction 702 732 - -
Pvu9g2341 732 MobiDBLite consensus disorder prediction 711 732 - -
Pvu9g2341 732 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 48 222 IPR014001 -
Pvu9g2341 732 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 253 394 IPR001650 -
Pvu9g2341 732 MobiDBLite consensus disorder prediction 647 677 - -
Pvu9g2341 732 Coils Coil 561 581 - -
Pvu9g2341 732 SMART ultradead3 36 238 IPR014001 -
Pvu9g2341 732 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 30 442 IPR004589 GO:0004386|GO:0006310
Pvu9g2341 732 CDD SF2_C_RecQ 230 363 - -
Pvu9g2341 732 Pfam DEAD/DEAH box helicase 43 209 IPR011545 GO:0003676|GO:0005524
Pvu9g2341 732 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE 3 4 717 - -
Pvu9g2341 732 Pfam Helicase conserved C-terminal domain 253 352 IPR001650 -
Pvu9g2341 732 Gene3D - 230 456 IPR027417 -
Pvu9g2341 732 Pfam RecQ zinc-binding 367 438 IPR032284 -
Pvu9g2341 732 Gene3D - 2 229 IPR027417 -
Pvu9g2341 732 SMART helicmild6 273 354 IPR001650 -
Pvu9g2341 732 PANTHER DNA HELICASE RECQ FAMILY MEMBER 4 717 - -
Pvu9g2341 732 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 374 IPR027417 -
Pvu9g2341 732 CDD DEXHc_RecQ 29 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2341 Pvu-Chr9 33491580 33499585 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2341 33 374 Eukaryotic Initiation Factors Gene Family AT3G19760 22.284 7.91e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2341 - K10901 gmx:100819601 1233.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2341 9 33491580 33499585 Pvu9g2341 9 33491580 33499585 ECH