Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu9g2341 | ATGCAGAAGAAGTCGACATTGCCACTGAGCGACGCGAATGCGAACAGGAAGAAGAAGGAACTGCGCAGCAAGGAAACGTTGGTGAAGCTTCTAAGATGGCATTTTGGGTACCCTGATTTTAGGGGCATGCAATTGGACGCTATTCAGTCGGTGCTCTCAGGAAAGGATTGTTTTTGCCTTATGCCAACTGGGGGAGGCAAGTCAATGTGTTATCAGATCCCTGCATTGGCAAAAACAGGAATTGTGCTTGTTGTATCTCCTTTAATAGCCTTAATGGAAAACCAAGTAATGGCACTGAAGGAGAAAGGGATTGCAGCAGATTTTCTCTCCTCAACAAAAACCGCGGATGCTAAAGTAAAGATTCACGAGGACCTTGATTCTGGAAAACCTTCTACAAGGCTGCTATATGTGACTCCAGAGTTGATAGCAACACCAGGGTTTATGTCAAAGCTGACCAAGATTTATACTAGGGGTCTGCTAACTCTCATTGCCATAGATGAGGCGCATTGCATCTCAAGTTGGGGTCATGATTTCAGACCTAGCTACCGTAAGCTTTCATCTTTGAGAAGCCACCTACCAGATGTACCAATATTAGCTTTGACTGCTACTGCTGCGCCAAAGGTTCAGAGGGATGTAGTTGAATCCTTGCGGATGCAAAATCCATTAGTACTCAAGTCTTCATTTAATCGTCCAAATATATATTATGAAGTTAGATACAAAGATCTATTGGATGATGCTTTTGCTGATTTATCTAATACACTCAAATCTCTGGGAGATGTCTGTGCAATAGTGTACTGCCTTGAACGTTCAATGTGTGATGACTTGTCAAGTAATCTATCCCAAAGTGGCATTTCATGTGCTGCTTATCATGCAGGATTGAATAATAAAATGCGAACTTCGGTATTAGATGATTGGATTTCTTCTAAGATAAAAGTTGTTGTTGCCACTGTTGCTTTTGGAATGGGCATTGATAGAAAGGATGTCAGAATTGTGTGCCATTTCAATATTCCCAAGTCAATGGAAGCATTCTATCAAGAGTCTGGCAGAGCTGGTCGTGATCAATTGCCATCTAGAAGTTTGTTGTACTATGGGGTAGATGATTGCAAAAGAATGAAATTTATATTAAGTAAATCGGGGAGCAAGAACTCACAGTCATCTAGTTCACAAGAAGAATCATCCAAAATATCCCTTACTGCTTTCAATCAGATGGTTGAATACTGTGAAGGATCTGGATGCCGCAGGAAAAGGATTCTTGAGAGTTTTGGGGAACAGGTAACTGCATCACTATGTGGAAAAACATGTGATGCCTGCAGACATGCAAACTTAGTTGCCAGATGTTTGGAGGATCTCAAAACTGTTTCTGCTCTATGCCATAAAAATGGTTCTTCTCGAGTTTTTATAACCAGTTCCACCAGCGCAATCGATGGAGAACAGTTATCTGAATTCTGGAATCGGGGAGGGGAAGCAAGTGGATCAGAGGAAGATATATCTGATTCAGAAGATGGTAATGAGGTTATCAACAACCTAACCAGGTCAAAGCTTCAATCCAGATTGGGAGTAAATGAAAAGCTTGCGATGTTACAACGGGCAGAAGAAAACTTCTATAAAAATAATAACAGTTATAAACAGAGCAACAAAGTTGACAAGAATGCTATTTCTGATCCAATGCGAGGAGCAAGCAGGCAAAGGTTGCAAAATGCTCTAAAACAGGTTCAGCAACGGCTTGACAACTTCAAGATTGAAGTGGATACGTCAGCATCTTTCCTTGAAGATGAATGCTACAAGAAATATGGCAAGGCAGGCAAATCATTCTATTATTCGCAAGTGGCAAGTACTGTAAGATGGCTGAAGTCTGCTAGCTCCAGCGAATTGATGAACCGACTTCGTTCAATTAATGCTTCTGCCTCAATGAGTGTCGTGTCCGAAGCTAAACAGTCCCTTTCACCAGCTGAACAGCCCTTCAAATCGCCACCTGCTTTAGATCCTTGTGCCGAAGATACCAGCAATGAATACTCTGGCAATGCTAGATCAGAAACTTCTCCATGTATTGTGCCAATGGAAAGCTGTTCGTTTAATAATACCAACTTGCCACAAATACCATCCTTCTCTGAATTCGTAAATAGTAGGAAAACAAAAGGGGACCAGTTAAATGACACAAAGAAGCATTCAAGAGTCGAAAAGAAGATGAGGATGCAGTAA | 2199 | 0.4138 | MQKKSTLPLSDANANRKKKELRSKETLVKLLRWHFGYPDFRGMQLDAIQSVLSGKDCFCLMPTGGGKSMCYQIPALAKTGIVLVVSPLIALMENQVMALKEKGIAADFLSSTKTADAKVKIHEDLDSGKPSTRLLYVTPELIATPGFMSKLTKIYTRGLLTLIAIDEAHCISSWGHDFRPSYRKLSSLRSHLPDVPILALTATAAPKVQRDVVESLRMQNPLVLKSSFNRPNIYYEVRYKDLLDDAFADLSNTLKSLGDVCAIVYCLERSMCDDLSSNLSQSGISCAAYHAGLNNKMRTSVLDDWISSKIKVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGVDDCKRMKFILSKSGSKNSQSSSSQEESSKISLTAFNQMVEYCEGSGCRRKRILESFGEQVTASLCGKTCDACRHANLVARCLEDLKTVSALCHKNGSSRVFITSSTSAIDGEQLSEFWNRGGEASGSEEDISDSEDGNEVINNLTRSKLQSRLGVNEKLAMLQRAEENFYKNNNSYKQSNKVDKNAISDPMRGASRQRLQNALKQVQQRLDNFKIEVDTSASFLEDECYKKYGKAGKSFYYSQVASTVRWLKSASSSELMNRLRSINASASMSVVSEAKQSLSPAEQPFKSPPALDPCAEDTSNEYSGNARSETSPCIVPMESCSFNNTNLPQIPSFSEFVNSRKTKGDQLNDTKKHSRVEKKMRMQ* | 733 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu9g2341 | 732 | MobiDBLite | consensus disorder prediction | 702 | 732 | - | - | |
Pvu9g2341 | 732 | MobiDBLite | consensus disorder prediction | 711 | 732 | - | - | |
Pvu9g2341 | 732 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 48 | 222 | IPR014001 | - | |
Pvu9g2341 | 732 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 253 | 394 | IPR001650 | - | |
Pvu9g2341 | 732 | MobiDBLite | consensus disorder prediction | 647 | 677 | - | - | |
Pvu9g2341 | 732 | Coils | Coil | 561 | 581 | - | - | |
Pvu9g2341 | 732 | SMART | ultradead3 | 36 | 238 | IPR014001 | - | |
Pvu9g2341 | 732 | TIGRFAM | recQ_fam: ATP-dependent DNA helicase, RecQ family | 30 | 442 | IPR004589 | GO:0004386|GO:0006310 | |
Pvu9g2341 | 732 | CDD | SF2_C_RecQ | 230 | 363 | - | - | |
Pvu9g2341 | 732 | Pfam | DEAD/DEAH box helicase | 43 | 209 | IPR011545 | GO:0003676|GO:0005524 | |
Pvu9g2341 | 732 | PANTHER | ATP-DEPENDENT DNA HELICASE Q-LIKE 3 | 4 | 717 | - | - | |
Pvu9g2341 | 732 | Pfam | Helicase conserved C-terminal domain | 253 | 352 | IPR001650 | - | |
Pvu9g2341 | 732 | Gene3D | - | 230 | 456 | IPR027417 | - | |
Pvu9g2341 | 732 | Pfam | RecQ zinc-binding | 367 | 438 | IPR032284 | - | |
Pvu9g2341 | 732 | Gene3D | - | 2 | 229 | IPR027417 | - | |
Pvu9g2341 | 732 | SMART | helicmild6 | 273 | 354 | IPR001650 | - | |
Pvu9g2341 | 732 | PANTHER | DNA HELICASE RECQ FAMILY MEMBER | 4 | 717 | - | - | |
Pvu9g2341 | 732 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 80 | 374 | IPR027417 | - | |
Pvu9g2341 | 732 | CDD | DEXHc_RecQ | 29 | 229 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu9g2341 | Pvu-Chr9 | 33491580 | 33499585 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu9g2341 | 33 | 374 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 22.284 | 7.91e-13 | 69.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu9g2341 | - | K10901 | gmx:100819601 | 1233.78 |