Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2340 ATGGCACGTGAGTTCAACGATGTTGTTGCAGCAACGCTCCAATCCATACGCTACACCCGCGGTTCCCTCCACCTTCTCGATCAGAGAAAGCTCCCTCTGGAGACAACTTACTTGGAAATTCGGGATTCAACGGATGGCTGGAATGCCATTCGGGATATGGTGGTCCGGGGAGCACCTGCTATTGCGATTGCGGCGGCACTCTCTTTGGCTGTGGAGGTTTTCAATTTAGATGGTTTCAATGGTTCAGCTGGTGAAGCTGTTTCCTTCCTGCAGAATAAATTAGAATATCTTGTGTCTAGTCGGCCAACTGCAGTGAATCTGTCGGATGCTGCGACAAAACTCAAAGAAGTCGTATCAAATGCTGCTGCTACCGCTTCAGAGGGCAGGAGTGTTTTCCAGGCATTTATAGAAGCTTCTGAAGTTATGCTTGAGGATGATGTTGCCTCAAATCGAGCTATTGGCTCTTATGGAGCTACCTGTATTCAGCAACAAACAGAGAAACAAAAGCTTTCTGTTTTGACGCATTGCAATACTGGAAGTCTAGCCACAGCTGGATATGGTACTGCTCTGGGTGTGATCCGTGCACTTCACAGTGGAGGAGTTCTAGAAAGGGCTTATTGCACAGAAACACGCCCATTTAATCAAGGATCTAGACTTACTGCCTATGAATTGGTGCATGAAAAAATACCATCAACTCTGATTGCTGATTCTGCTGCAGCTGCATTAATGAAAGCAGGAAGTGTGGACGCTGTTGTTGTTGGGGCTGATCGTGTTGCATCAAACGGTGACACGGCCAACAAAATTGGAACCTACAGCGTTGCCTTGTTCGCGAAGTTTCATAATGTACCTTTTTATGTGGCTGCACCCCTCACTTCTGTTGATCTATCACTTTCTTCTGGACAAGAAATTGTAATTGAGGAGAGGTCCCCCAAGGAATTGTTGAACGCACGGGGAGGACTTGGAGAGCAGGTTGCTGCCTCGGGAATTTCTGTGTGGAACCCGGCTTTCGATGTTACTCCTGCAAATCTAATATCTGGGATCATCACGGAGAAGGGTGTCATTACGAAGACTTCTGCTGGTGATGCATTTGACATCAAAGCTTTTGTACAGAAAACAGGTTAA 1122 0.4661 MAREFNDVVAATLQSIRYTRGSLHLLDQRKLPLETTYLEIRDSTDGWNAIRDMVVRGAPAIAIAAALSLAVEVFNLDGFNGSAGEAVSFLQNKLEYLVSSRPTAVNLSDAATKLKEVVSNAAATASEGRSVFQAFIEASEVMLEDDVASNRAIGSYGATCIQQQTEKQKLSVLTHCNTGSLATAGYGTALGVIRALHSGGVLERAYCTETRPFNQGSRLTAYELVHEKIPSTLIADSAAAALMKAGSVDAVVVGADRVASNGDTANKIGTYSVALFAKFHNVPFYVAAPLTSVDLSLSSGQEIVIEERSPKELLNARGGLGEQVAASGISVWNPAFDVTPANLISGIITEKGVITKTSAGDAFDIKAFVQKTG* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2340 373 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 11 370 - -
Pvu9g2340 373 TIGRFAM eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 41 356 IPR011559 GO:0044249
Pvu9g2340 373 Gene3D - 11 202 IPR027363 -
Pvu9g2340 373 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 13 365 IPR005251 -
Pvu9g2340 373 Gene3D - 203 368 IPR042529 -
Pvu9g2340 373 Pfam Initiation factor 2 subunit family 55 355 IPR000649 GO:0044237
Pvu9g2340 373 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 11 370 - -
Pvu9g2340 373 TIGRFAM salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 14 356 IPR005251 -
Pvu9g2340 373 SUPERFAMILY NagB/RpiA/CoA transferase-like 10 358 IPR037171 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2340 52 371 Eukaryotic Initiation Factors Gene Family AT2G05830 77.882 3.96e-174 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2340 K08963 - gmx:100799311 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2340 9 33486632 33489875 Pvu9g2340 9 33486632 33489875 ECH